CUS_5073 protein (Ruminococcus albus 8) - STRING interaction network

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Score

CUS_5073

AMP-binding enzyme; Identified by match to protein family HMM PF00501. (501 aa)

Predicted Functional Partners:

CUS_5645

0.999

CUS_5074

0.987

CUS_5644

0.965

CUS_6122

0.965

CUS_5646

0.918

fabD

0.916

CUS_5643

0.871

rplF

0.853

CUS_5647

0.847

rplC

0.832

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_5073	CUS_5074	CUS_5073	CUS_5074	AMP-binding enzyme; Identified by match to protein family HMM PF00501.	Hypothetical protein.	0.987
CUS_5073	CUS_5643	CUS_5073	CUS_5643	AMP-binding enzyme; Identified by match to protein family HMM PF00501.	AMP-binding enzyme; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733.	0.871
CUS_5073	CUS_5644	CUS_5073	CUS_5644	AMP-binding enzyme; Identified by match to protein family HMM PF00501.	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	0.965
CUS_5073	CUS_5645	CUS_5073	CUS_5645	AMP-binding enzyme; Identified by match to protein family HMM PF00501.	Beta-ketoacyl synthase, N-terminal domain protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF02801.	0.999
CUS_5073	CUS_5646	CUS_5073	CUS_5646	AMP-binding enzyme; Identified by match to protein family HMM PF00501.	AMP-binding enzyme; Identified by match to protein family HMM PF00106; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF08659.	0.918
CUS_5073	CUS_5647	CUS_5073	CUS_5647	AMP-binding enzyme; Identified by match to protein family HMM PF00501.	Beta-ketoacyl synthase, N-terminal domain protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF02801.	0.847
CUS_5073	CUS_6122	CUS_5073	CUS_6122	AMP-binding enzyme; Identified by match to protein family HMM PF00501.	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	0.965
CUS_5073	fabD	CUS_5073	CUS_6427	AMP-binding enzyme; Identified by match to protein family HMM PF00501.	[acyl-carrier-protein] S-malonyltransferase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128.	0.916
CUS_5073	rplC	CUS_5073	CUS_6514	AMP-binding enzyme; Identified by match to protein family HMM PF00501.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.832
CUS_5073	rplF	CUS_5073	CUS_6499	AMP-binding enzyme; Identified by match to protein family HMM PF00501.	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	0.853
CUS_5074	CUS_5073	CUS_5074	CUS_5073	Hypothetical protein.	AMP-binding enzyme; Identified by match to protein family HMM PF00501.	0.987
CUS_5074	CUS_5643	CUS_5074	CUS_5643	Hypothetical protein.	AMP-binding enzyme; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733.	0.944
CUS_5074	CUS_5644	CUS_5074	CUS_5644	Hypothetical protein.	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	0.990
CUS_5074	CUS_5645	CUS_5074	CUS_5645	Hypothetical protein.	Beta-ketoacyl synthase, N-terminal domain protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF02801.	0.860
CUS_5074	CUS_5646	CUS_5074	CUS_5646	Hypothetical protein.	AMP-binding enzyme; Identified by match to protein family HMM PF00106; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF08659.	0.997
CUS_5074	CUS_5647	CUS_5074	CUS_5647	Hypothetical protein.	Beta-ketoacyl synthase, N-terminal domain protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF02801.	0.880
CUS_5074	CUS_6122	CUS_5074	CUS_6122	Hypothetical protein.	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	0.989
CUS_5074	fabD	CUS_5074	CUS_6427	Hypothetical protein.	[acyl-carrier-protein] S-malonyltransferase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128.	0.978
CUS_5074	rplC	CUS_5074	CUS_6514	Hypothetical protein.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.866
CUS_5643	CUS_5073	CUS_5643	CUS_5073	AMP-binding enzyme; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733.	AMP-binding enzyme; Identified by match to protein family HMM PF00501.	0.871