CUS_5156 protein (Ruminococcus albus 8) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CUS_5156

NQR2 and RnfD family protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. (306 aa)

Predicted Functional Partners:

rnfC

0.999

CUS_4932

0.899

CUS_8110

0.844

nifJ

0.668

CUS_5158

0.559

CUS_8112

0.520

CUS_5155

0.419

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_4932	CUS_5156	CUS_4932	CUS_5156	Ferredoxin; Identified by match to protein family HMM PF00037.	NQR2 and RnfD family protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.	0.899
CUS_4932	nifJ	CUS_4932	CUS_6517	Ferredoxin; Identified by match to protein family HMM PF00037.	Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.	0.999
CUS_4932	rnfC	CUS_4932	CUS_5157	Ferredoxin; Identified by match to protein family HMM PF00037.	Electron transport complex, RnfABCDGE type, C subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF01512.	0.938
CUS_5155	CUS_5156	CUS_5155	CUS_5156	Hypothetical protein; Identified by glimmer; putative.	NQR2 and RnfD family protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.	0.419
CUS_5155	rnfC	CUS_5155	CUS_5157	Hypothetical protein; Identified by glimmer; putative.	Electron transport complex, RnfABCDGE type, C subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF01512.	0.419
CUS_5156	CUS_4932	CUS_5156	CUS_4932	NQR2 and RnfD family protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.	Ferredoxin; Identified by match to protein family HMM PF00037.	0.899
CUS_5156	CUS_5155	CUS_5156	CUS_5155	NQR2 and RnfD family protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.	Hypothetical protein; Identified by glimmer; putative.	0.419
CUS_5156	CUS_5158	CUS_5156	CUS_5158	NQR2 and RnfD family protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.	Hypothetical protein; Identified by glimmer; putative.	0.559
CUS_5156	CUS_8110	CUS_5156	CUS_8110	NQR2 and RnfD family protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.	ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.	0.844
CUS_5156	CUS_8112	CUS_5156	CUS_8112	NQR2 and RnfD family protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.	Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456.	0.520
CUS_5156	nifJ	CUS_5156	CUS_6517	NQR2 and RnfD family protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.	Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.	0.668
CUS_5156	rnfC	CUS_5156	CUS_5157	NQR2 and RnfD family protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.	Electron transport complex, RnfABCDGE type, C subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF01512.	0.999
CUS_5158	CUS_5156	CUS_5158	CUS_5156	Hypothetical protein; Identified by glimmer; putative.	NQR2 and RnfD family protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.	0.559
CUS_5158	rnfC	CUS_5158	CUS_5157	Hypothetical protein; Identified by glimmer; putative.	Electron transport complex, RnfABCDGE type, C subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF01512.	0.559
CUS_8110	CUS_5156	CUS_8110	CUS_5156	ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.	NQR2 and RnfD family protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.	0.844
CUS_8110	CUS_8112	CUS_8110	CUS_8112	ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.	Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456.	0.943
CUS_8110	rnfC	CUS_8110	CUS_5157	ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.	Electron transport complex, RnfABCDGE type, C subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF01512.	0.759
CUS_8112	CUS_5156	CUS_8112	CUS_5156	Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456.	NQR2 and RnfD family protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.	0.520
CUS_8112	CUS_8110	CUS_8112	CUS_8110	Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456.	ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.	0.943
CUS_8112	rnfC	CUS_8112	CUS_5157	Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456.	Electron transport complex, RnfABCDGE type, C subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF01512.	0.519

page 1 of 2

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About