CUS_5173 protein (Ruminococcus albus 8) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Gene Fusion

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[Homology]

Score

CUS_5173

Conserved domain protein. (616 aa)

Predicted Functional Partners:

CUS_6394

0.976

CUS_5174

0.964

CUS_5171

0.876

CUS_5172

0.866

CUS_5503

0.781

CUS_7471

0.781

CUS_6752

0.738

CUS_5508

0.676

CUS_7752

0.662

CUS_7083

0.613

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CUS_5171	CUS_5172	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.899
CUS_5171	CUS_5173	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	Conserved domain protein.	0.876
CUS_5171	CUS_5174	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.986
CUS_5171	CUS_5503	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.789
CUS_5171	CUS_5508	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	Efflux ABC transporter, permease protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02687.	0.882
CUS_5171	CUS_6394	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	Dockerin type I repeat protein; Identified by match to protein family HMM PF00404.	0.891
CUS_5171	CUS_6752	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	Conserved domain protein.	0.647
CUS_5171	CUS_7083	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.548
CUS_5171	CUS_7471	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687; match to protein family HMM PF06696.	0.789
CUS_5171	CUS_7752	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.770
CUS_5172	CUS_5171	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	0.899
CUS_5172	CUS_5173	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Conserved domain protein.	0.866
CUS_5172	CUS_5174	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.991
CUS_5172	CUS_5503	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.954
CUS_5172	CUS_5508	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux ABC transporter, permease protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02687.	0.981
CUS_5172	CUS_6752	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Conserved domain protein.	0.490
CUS_5172	CUS_7083	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.474
CUS_5172	CUS_7471	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687; match to protein family HMM PF06696.	0.954
CUS_5172	CUS_7752	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.951
CUS_5173	CUS_5171	Conserved domain protein.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	0.876