CUS_5194 protein (Ruminococcus albus 8) - STRING interaction network

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CUS_5194

Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432. (449 aa)

Predicted Functional Partners:

CUS_5193

0.781

CUS_5195

0.781

CUS_7882

0.769

CUS_5603

0.759

CUS_6085

0.744

CUS_8108

0.730

CUS_7883

0.723

CUS_4594

0.721

CUS_6610

0.720

CUS_7991

0.718

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CUS_4594	CUS_5194	Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	0.721
CUS_4594	CUS_5603	Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.	Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	0.617
CUS_4594	CUS_6085	Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.	Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.	0.664
CUS_4594	CUS_6610	Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.	GDSL-like protein.	0.655
CUS_4594	CUS_7882	Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.	Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02228.	0.709
CUS_4594	CUS_7883	Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.	Hypothetical protein.	0.606
CUS_4594	CUS_7991	Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.	Conserved domain protein.	0.593
CUS_4594	CUS_8108	Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.576
CUS_5193	CUS_5194	Conserved domain protein.	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	0.781
CUS_5193	CUS_5195	Conserved domain protein.	Hypothetical protein; Identified by glimmer; putative.	0.781
CUS_5194	CUS_4594	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.	0.721
CUS_5194	CUS_5193	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	Conserved domain protein.	0.781
CUS_5194	CUS_5195	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	Hypothetical protein; Identified by glimmer; putative.	0.781
CUS_5194	CUS_5603	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	0.759
CUS_5194	CUS_6085	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.	0.744
CUS_5194	CUS_6610	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	GDSL-like protein.	0.720
CUS_5194	CUS_7882	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02228.	0.769
CUS_5194	CUS_7883	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	Hypothetical protein.	0.723
CUS_5194	CUS_7991	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	Conserved domain protein.	0.718
CUS_5194	CUS_8108	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.730

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