Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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co-expression
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[Homology]
Score
CUS_5236Putative spore germination protein KA; Identified by match to protein family HMM PF03323. (488 aa)    
Predicted Functional Partners:
CUS_5239
Germination protein, Ger(x)C family.
 
  
 0.847
spoVAD
Stage V sporulation protein AD; Identified by match to protein family HMM PF07451.
  
  
 0.800
spoVAC
Stage V sporulation protein AC; Identified by match to protein family HMM PF03862; match to protein family HMM TIGR02838.
  
  
 0.794
CUS_5966
Putative stage II sporulation protein E; Identified by match to protein family HMM PF07228.
  
   
 0.785
spoVAE
Stage V sporulation protein AE; Identified by match to protein family HMM PF03862; match to protein family HMM TIGR02839.
  
  
 0.784
spoIVA
Stage IV sporulation protein A; Identified by match to protein family HMM PF09547; match to protein family HMM TIGR02836.
  
     0.774
spoIVB
SpoIVB peptidase; Identified by match to protein family HMM PF05580; match to protein family HMM TIGR02860.
  
     0.774
CUS_6320
Putative stage V sporulation protein T; Identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439.
  
     0.772
gpr
Putative GPR endopeptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.771
sigE
RNA polymerase sigma-E factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
     0.771
Your Current Organism:
Ruminococcus albus 8
NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8
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