Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CUS_5330O-antigen polymerase; Identified by match to protein family HMM PF04932. (399 aa)    
Predicted Functional Partners:
CUS_6335
Putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883.
  
 
 0.876
mviN
Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
    
 0.848
CUS_5332
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
  
 
 0.823
CUS_5331
Hypothetical protein.
       0.774
CUS_5333
Identified by match to protein family HMM PF04991.
    
  0.746
CUS_5335
Identified by match to protein family HMM PF04991.
    
  0.723
CUS_5336
Putative glycerol-3-phosphate cytidylyltransferase; Identified by match to protein family HMM PF01408; match to protein family HMM PF01467; match to protein family HMM TIGR00125.
     
 0.719
CUS_5334
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
       0.692
CUS_5340
Bacterial sugar transferase; Identified by match to protein family HMM PF02397.
  
 
 0.519
CUS_5645
Beta-ketoacyl synthase, N-terminal domain protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF02801.
  
 
  0.443
Your Current Organism:
Ruminococcus albus 8
NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.