STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUS_5512Hypothetical protein. (167 aa)    
Predicted Functional Partners:
CUS_5818
Putative serine/threonine-protein kinase PrkC; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163; match to protein family HMM PF03793; match to protein family HMM PF07714.
 
 0.975
CUS_5153
PASTA domain protein; Identified by match to protein family HMM PF03793.
 
 0.909
CUS_7556
Kinase domain protein; Identified by match to protein family HMM PF00069; match to protein family HMM PF08239.
 
 0.860
CUS_6365
Conserved domain protein.
  
 0.850
CUS_5524
Kinase domain protein; Identified by match to protein family HMM PF00069.
 
  0.843
CUS_4404
PASTA domain protein; Identified by match to protein family HMM PF00069; match to protein family HMM PF03793.
 
  0.842
CUS_6071
PASTA domain protein; Identified by match to protein family HMM PF03793.
 
  0.840
CUS_7533
Protein phosphatase 2C; Identified by match to protein family HMM PF00481.
  
     0.774
CUS_5523
Protein phosphatase 2C; Identified by match to protein family HMM PF00481.
  
     0.772
CUS_7272
Identified by match to protein family HMM PF00230; match to protein family HMM TIGR00861; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
   0.753
Your Current Organism:
Ruminococcus albus 8
NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.