CUS_5540 protein (Ruminococcus albus 8) - STRING interaction network

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Score

CUS_5540

S4 domain protein; Identified by match to protein family HMM PF01479. (80 aa)

Predicted Functional Partners:

rplS

0.938

rplQ

0.920

rpmD

0.919

rpmB

0.915

rpmH

0.913

CUS_6623

0.912

rplM

0.910

rplN

0.910

rplV

0.910

rplT

0.910

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_5540	CUS_6623	CUS_5540	CUS_6623	S4 domain protein; Identified by match to protein family HMM PF01479.	Putative fibronectin-binding protein; Identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	0.912
CUS_5540	rplM	CUS_5540	CUS_4949	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.910
CUS_5540	rplN	CUS_5540	CUS_6504	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.910
CUS_5540	rplQ	CUS_5540	CUS_6484	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L17; Identified by match to protein family HMM PF01196.	0.920
CUS_5540	rplS	CUS_5540	CUS_7793	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.938
CUS_5540	rplT	CUS_5540	CUS_7452	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.910
CUS_5540	rplV	CUS_5540	CUS_6509	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.910
CUS_5540	rpmB	CUS_5540	CUS_6620	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L28; Identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.	0.915
CUS_5540	rpmD	CUS_5540	CUS_6496	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L30; Identified by match to protein family HMM PF00327; match to protein family HMM TIGR01308.	0.919
CUS_5540	rpmH	CUS_5540	CUS_4976	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	0.913
CUS_6623	CUS_5540	CUS_6623	CUS_5540	Putative fibronectin-binding protein; Identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	S4 domain protein; Identified by match to protein family HMM PF01479.	0.912
CUS_6623	rplM	CUS_6623	CUS_4949	Putative fibronectin-binding protein; Identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.915
CUS_6623	rplN	CUS_6623	CUS_6504	Putative fibronectin-binding protein; Identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.909
CUS_6623	rplQ	CUS_6623	CUS_6484	Putative fibronectin-binding protein; Identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	Ribosomal protein L17; Identified by match to protein family HMM PF01196.	0.806
CUS_6623	rplS	CUS_6623	CUS_7793	Putative fibronectin-binding protein; Identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.863
CUS_6623	rplT	CUS_6623	CUS_7452	Putative fibronectin-binding protein; Identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.806
CUS_6623	rplV	CUS_6623	CUS_6509	Putative fibronectin-binding protein; Identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.908
CUS_6623	rpmB	CUS_6623	CUS_6620	Putative fibronectin-binding protein; Identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	Ribosomal protein L28; Identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.	0.806
CUS_6623	rpmD	CUS_6623	CUS_6496	Putative fibronectin-binding protein; Identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	Ribosomal protein L30; Identified by match to protein family HMM PF00327; match to protein family HMM TIGR01308.	0.889
CUS_6623	rpmH	CUS_6623	CUS_4976	Putative fibronectin-binding protein; Identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	0.806