Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUS_4440 | CUS_5591 | CUS_4440 | CUS_5591 | Hypothetical protein. | Hypothetical protein. | 0.527 |
CUS_4440 | CUS_5592 | CUS_4440 | CUS_5592 | Hypothetical protein. | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | 0.876 |
CUS_4440 | CUS_5991 | CUS_4440 | CUS_5991 | Hypothetical protein. | Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525. | 0.797 |
CUS_5590 | CUS_5591 | CUS_5590 | CUS_5591 | Conserved domain protein. | Hypothetical protein. | 0.403 |
CUS_5590 | CUS_5592 | CUS_5590 | CUS_5592 | Conserved domain protein. | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | 0.403 |
CUS_5591 | CUS_4440 | CUS_5591 | CUS_4440 | Hypothetical protein. | Hypothetical protein. | 0.527 |
CUS_5591 | CUS_5590 | CUS_5591 | CUS_5590 | Hypothetical protein. | Conserved domain protein. | 0.403 |
CUS_5591 | CUS_5592 | CUS_5591 | CUS_5592 | Hypothetical protein. | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | 0.948 |
CUS_5592 | CUS_4440 | CUS_5592 | CUS_4440 | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | Hypothetical protein. | 0.876 |
CUS_5592 | CUS_5590 | CUS_5592 | CUS_5590 | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | Conserved domain protein. | 0.403 |
CUS_5592 | CUS_5591 | CUS_5592 | CUS_5591 | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | Hypothetical protein. | 0.948 |
CUS_5592 | CUS_5991 | CUS_5592 | CUS_5991 | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525. | 0.820 |
CUS_5592 | CUS_6698 | CUS_5592 | CUS_6698 | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF01297; match to protein family HMM PF09223. | 0.422 |
CUS_5592 | CUS_7576 | CUS_5592 | CUS_7576 | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | Putative cadmium efflux system accessory protein; Identified by match to protein family HMM PF01022. | 0.771 |
CUS_5592 | CUS_7579 | CUS_5592 | CUS_7579 | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | Heavy metal-associated domain protein; Identified by match to protein family HMM PF00403. | 0.799 |
CUS_5592 | CUS_7625 | CUS_5592 | CUS_7625 | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | Heavy metal-binding family protein. | 0.863 |
CUS_5592 | nifJ | CUS_5592 | CUS_6517 | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. | 0.406 |
CUS_5991 | CUS_4440 | CUS_5991 | CUS_4440 | Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525. | Hypothetical protein. | 0.797 |
CUS_5991 | CUS_5592 | CUS_5991 | CUS_5592 | Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525. | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | 0.820 |
CUS_5991 | CUS_6698 | CUS_5991 | CUS_6698 | Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525. | ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF01297; match to protein family HMM PF09223. | 0.510 |
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