CUS_5627 protein (Ruminococcus albus 8) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

CUS_5627

Identified by match to protein family HMM TIGR01987. (168 aa)

Predicted Functional Partners:

CUS_5626

0.939

CUS_5628

0.636

CUS_4682

0.586

CUS_5625

0.572

CUS_4774

0.569

CUS_4756

0.536

CUS_4775

0.528

CUS_4370

0.502

CUS_5632

0.453

CUS_5631

0.421

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CUS_4370	CUS_4682	Hypothetical protein.	Identified by match to protein family HMM PF08011.	0.664
CUS_4370	CUS_4774	Hypothetical protein.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.665
CUS_4370	CUS_4775	Hypothetical protein.	Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.625
CUS_4370	CUS_5627	Hypothetical protein.	Identified by match to protein family HMM TIGR01987.	0.502
CUS_4682	CUS_4370	Identified by match to protein family HMM PF08011.	Hypothetical protein.	0.664
CUS_4682	CUS_5626	Identified by match to protein family HMM PF08011.	Nucleotidyltransferase domain protein; Identified by match to protein family HMM PF01909.	0.494
CUS_4682	CUS_5627	Identified by match to protein family HMM PF08011.	Identified by match to protein family HMM TIGR01987.	0.586
CUS_4756	CUS_5627	Toxin-antitoxin system, toxin component, PIN family.	Identified by match to protein family HMM TIGR01987.	0.536
CUS_4756	CUS_5631	Toxin-antitoxin system, toxin component, PIN family.	Identified by match to protein family HMM PF04365.	0.563
CUS_4756	CUS_5632	Toxin-antitoxin system, toxin component, PIN family.	Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein.	0.479
CUS_4774	CUS_4370	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein.	0.665
CUS_4774	CUS_4775	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.952
CUS_4774	CUS_5626	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Nucleotidyltransferase domain protein; Identified by match to protein family HMM PF01909.	0.478
CUS_4774	CUS_5627	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Identified by match to protein family HMM TIGR01987.	0.569
CUS_4775	CUS_4370	Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein.	0.625
CUS_4775	CUS_4774	Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.952
CUS_4775	CUS_5626	Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Nucleotidyltransferase domain protein; Identified by match to protein family HMM PF01909.	0.512
CUS_4775	CUS_5627	Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Identified by match to protein family HMM TIGR01987.	0.528
CUS_5625	CUS_5626	Hypothetical protein; Identified by glimmer; putative.	Nucleotidyltransferase domain protein; Identified by match to protein family HMM PF01909.	0.572
CUS_5625	CUS_5627	Hypothetical protein; Identified by glimmer; putative.	Identified by match to protein family HMM TIGR01987.	0.572