alr protein (Ruminococcus albus 8) - STRING interaction network

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Score

alr

Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (374 aa)

Predicted Functional Partners:

murF

0.978

ddl

0.907

glnA

0.883

CUS_5644

0.860

CUS_6122

0.860

CUS_5221

0.859

gdhA

0.850

CUS_6918

0.843

murC

0.842

CUS_5996

0.828

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_5221	alr	CUS_5221	CUS_5692	Aminotransferase, class I/II; Identified by match to protein family HMM PF00155.	Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.	0.859
CUS_5221	gdhA	CUS_5221	CUS_5926	Aminotransferase, class I/II; Identified by match to protein family HMM PF00155.	NAD(P)-specific glutamate dehydrogenase; Identified by match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.862
CUS_5221	glnA	CUS_5221	CUS_5560	Aminotransferase, class I/II; Identified by match to protein family HMM PF00155.	Glutamine synthetase, beta-grasp domain protein; Identified by match to protein family HMM PF00120; match to protein family HMM PF03951; Belongs to the glutamine synthetase family.	0.415
CUS_5644	CUS_6122	CUS_5644	CUS_6122	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	0.999
CUS_5644	CUS_6918	CUS_5644	CUS_6918	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	Phosphoribosylformylglycinamidine synthase; Identified by match to protein family HMM PF02769; match to protein family HMM TIGR01857.	0.755
CUS_5644	alr	CUS_5644	CUS_5692	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.	0.860
CUS_5644	ddl	CUS_5644	CUS_8079	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	D-ala D-ala ligase N-terminal domain protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.	0.877
CUS_5996	CUS_6918	CUS_5996	CUS_6918	Glutamine synthetase, catalytic domain protein; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family.	Phosphoribosylformylglycinamidine synthase; Identified by match to protein family HMM PF02769; match to protein family HMM TIGR01857.	0.515
CUS_5996	alr	CUS_5996	CUS_5692	Glutamine synthetase, catalytic domain protein; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family.	Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.	0.828
CUS_5996	ddl	CUS_5996	CUS_8079	Glutamine synthetase, catalytic domain protein; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family.	D-ala D-ala ligase N-terminal domain protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.	0.492
CUS_5996	gdhA	CUS_5996	CUS_5926	Glutamine synthetase, catalytic domain protein; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family.	NAD(P)-specific glutamate dehydrogenase; Identified by match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.945
CUS_5996	glnA	CUS_5996	CUS_5560	Glutamine synthetase, catalytic domain protein; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family.	Glutamine synthetase, beta-grasp domain protein; Identified by match to protein family HMM PF00120; match to protein family HMM PF03951; Belongs to the glutamine synthetase family.	0.949
CUS_5996	murF	CUS_5996	CUS_6550	Glutamine synthetase, catalytic domain protein; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family.	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.	0.492
CUS_6122	CUS_5644	CUS_6122	CUS_5644	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	0.999
CUS_6122	CUS_6918	CUS_6122	CUS_6918	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	Phosphoribosylformylglycinamidine synthase; Identified by match to protein family HMM PF02769; match to protein family HMM TIGR01857.	0.755
CUS_6122	alr	CUS_6122	CUS_5692	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.	0.860
CUS_6122	ddl	CUS_6122	CUS_8079	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	D-ala D-ala ligase N-terminal domain protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.	0.877
CUS_6918	CUS_5644	CUS_6918	CUS_5644	Phosphoribosylformylglycinamidine synthase; Identified by match to protein family HMM PF02769; match to protein family HMM TIGR01857.	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	0.755
CUS_6918	CUS_5996	CUS_6918	CUS_5996	Phosphoribosylformylglycinamidine synthase; Identified by match to protein family HMM PF02769; match to protein family HMM TIGR01857.	Glutamine synthetase, catalytic domain protein; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family.	0.515
CUS_6918	CUS_6122	CUS_6918	CUS_6122	Phosphoribosylformylglycinamidine synthase; Identified by match to protein family HMM PF02769; match to protein family HMM TIGR01857.	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	0.755