CUS_5852 protein (Ruminococcus albus 8) - STRING interaction network

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Score

CUS_5852

Sigma-70, region 4; Identified by match to protein family HMM PF04545; match to protein family HMM PF08281. (111 aa)

Predicted Functional Partners:

rpoC

0.681

rpoB

0.659

CUS_5851

0.658

CUS_6238

0.627

CUS_5811

0.576

rpoA

0.576

topA

0.416

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_5811	CUS_5852	CUS_5811	CUS_5852	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Sigma-70, region 4; Identified by match to protein family HMM PF04545; match to protein family HMM PF08281.	0.576
CUS_5811	rpoA	CUS_5811	CUS_6485	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	RNA polymerase, alpha subunit C-terminal domain protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
CUS_5811	rpoB	CUS_5811	CUS_7658	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
CUS_5811	rpoC	CUS_5811	CUS_7659	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
CUS_5811	topA	CUS_5811	CUS_7449	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.478
CUS_5851	CUS_5852	CUS_5851	CUS_5852	Orn/Lys/Arg decarboxylase, major domain protein; Identified by match to protein family HMM PF01276.	Sigma-70, region 4; Identified by match to protein family HMM PF04545; match to protein family HMM PF08281.	0.658
CUS_5852	CUS_5811	CUS_5852	CUS_5811	Sigma-70, region 4; Identified by match to protein family HMM PF04545; match to protein family HMM PF08281.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.576
CUS_5852	CUS_5851	CUS_5852	CUS_5851	Sigma-70, region 4; Identified by match to protein family HMM PF04545; match to protein family HMM PF08281.	Orn/Lys/Arg decarboxylase, major domain protein; Identified by match to protein family HMM PF01276.	0.658
CUS_5852	CUS_6238	CUS_5852	CUS_6238	Sigma-70, region 4; Identified by match to protein family HMM PF04545; match to protein family HMM PF08281.	Methyltransferase CheR, SAM binding domain protein; Identified by match to protein family HMM PF01739; match to protein family HMM PF03705.	0.627
CUS_5852	rpoA	CUS_5852	CUS_6485	Sigma-70, region 4; Identified by match to protein family HMM PF04545; match to protein family HMM PF08281.	RNA polymerase, alpha subunit C-terminal domain protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.576
CUS_5852	rpoB	CUS_5852	CUS_7658	Sigma-70, region 4; Identified by match to protein family HMM PF04545; match to protein family HMM PF08281.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.659
CUS_5852	rpoC	CUS_5852	CUS_7659	Sigma-70, region 4; Identified by match to protein family HMM PF04545; match to protein family HMM PF08281.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.681
CUS_5852	topA	CUS_5852	CUS_7449	Sigma-70, region 4; Identified by match to protein family HMM PF04545; match to protein family HMM PF08281.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.416
CUS_6238	CUS_5852	CUS_6238	CUS_5852	Methyltransferase CheR, SAM binding domain protein; Identified by match to protein family HMM PF01739; match to protein family HMM PF03705.	Sigma-70, region 4; Identified by match to protein family HMM PF04545; match to protein family HMM PF08281.	0.627
rpoA	CUS_5811	CUS_6485	CUS_5811	RNA polymerase, alpha subunit C-terminal domain protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.999
rpoA	CUS_5852	CUS_6485	CUS_5852	RNA polymerase, alpha subunit C-terminal domain protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Sigma-70, region 4; Identified by match to protein family HMM PF04545; match to protein family HMM PF08281.	0.576
rpoA	rpoB	CUS_6485	CUS_7658	RNA polymerase, alpha subunit C-terminal domain protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	CUS_6485	CUS_7659	RNA polymerase, alpha subunit C-terminal domain protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	topA	CUS_6485	CUS_7449	RNA polymerase, alpha subunit C-terminal domain protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.935
rpoB	CUS_5811	CUS_7658	CUS_5811	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.999