STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUS_5944Conserved domain protein. (329 aa)    
Predicted Functional Partners:
CUS_5941
Hypothetical protein.
 
     0.915
CUS_5939
TraG/TraD family protein.
 
     0.855
CUS_5938
Hypothetical protein; Identified by glimmer; putative.
 
    0.812
CUS_7463
Hypothetical protein; Identified by glimmer; putative.
  
     0.773
CUS_7901
Hypothetical protein; Identified by glimmer; putative.
  
     0.772
CUS_6652
Hypothetical protein.
  
     0.767
CUS_4864
Hypothetical protein; Identified by glimmer; putative.
  
     0.766
CUS_5945
Conserved domain protein.
       0.757
CUS_4309
Hypothetical protein.
  
     0.756
CUS_4316
TraG family protein.
  
     0.755
Your Current Organism:
Ruminococcus albus 8
NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.