Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUS_5991 | CUS_6088 | CUS_5991 | CUS_6088 | Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525. | Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022. | 0.479 |
CUS_5991 | nifJ | CUS_5991 | CUS_6517 | Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525. | Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. | 0.525 |
CUS_6087 | CUS_6088 | CUS_6087 | CUS_6088 | Identified by match to protein family HMM PF07853. | Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022. | 0.975 |
CUS_6087 | CUS_6089 | CUS_6087 | CUS_6089 | Identified by match to protein family HMM PF07853. | Hypothetical protein. | 0.788 |
CUS_6088 | CUS_5991 | CUS_6088 | CUS_5991 | Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022. | Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525. | 0.479 |
CUS_6088 | CUS_6087 | CUS_6088 | CUS_6087 | Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022. | Identified by match to protein family HMM PF07853. | 0.975 |
CUS_6088 | CUS_6089 | CUS_6088 | CUS_6089 | Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022. | Hypothetical protein. | 0.788 |
CUS_6088 | birA | CUS_6088 | CUS_7358 | Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022. | biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.550 |
CUS_6088 | nifJ | CUS_6088 | CUS_6517 | Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022. | Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. | 0.520 |
CUS_6088 | npdA | CUS_6088 | CUS_7667 | Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022. | NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily. | 0.434 |
CUS_6089 | CUS_6087 | CUS_6089 | CUS_6087 | Hypothetical protein. | Identified by match to protein family HMM PF07853. | 0.788 |
CUS_6089 | CUS_6088 | CUS_6089 | CUS_6088 | Hypothetical protein. | Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022. | 0.788 |
birA | CUS_6088 | CUS_7358 | CUS_6088 | biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022. | 0.550 |
nifJ | CUS_5991 | CUS_6517 | CUS_5991 | Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. | Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525. | 0.525 |
nifJ | CUS_6088 | CUS_6517 | CUS_6088 | Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. | Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022. | 0.520 |
npdA | CUS_6088 | CUS_7667 | CUS_6088 | NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily. | Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022. | 0.434 |