STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kptARNA 2'-phosphotransferase-like protein; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. (187 aa)    
Predicted Functional Partners:
CUS_6136
Class II aldolase/adducin N-terminal domain protein; Identified by match to protein family HMM PF00596.
       0.741
CUS_7058
Identified by match to protein family HMM TIGR02452.
 
     0.708
CUS_5260
Hypothetical protein.
 
    0.705
fucU
L-fucose mutarotase; Identified by match to protein family HMM PF05025; Belongs to the RbsD / FucU family.
       0.693
CUS_6139
Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370.
       0.693
CUS_5259
Identified by match to protein family HMM PF05762.
 
     0.682
CUS_5261
ATPase, AAA family; Identified by match to protein family HMM PF07728.
  
     0.678
CUS_7874
Identified by match to protein family HMM TIGR02452.
 
     0.670
CUS_5257
Hypothetical protein.
  
     0.654
CUS_6988
ADP-ribosylglycohydrolase; Identified by match to protein family HMM PF03747.
 
   
 0.495
Your Current Organism:
Ruminococcus albus 8
NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.