CUS_6176 protein (Ruminococcus albus 8) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

CUS_6176

Hypothetical protein; Identified by glimmer; putative. (80 aa)

Predicted Functional Partners:

CUS_6175

0.774

CUS_6174

0.773

CUS_6177

0.561

CUS_6173

0.550

CUS_6171

0.546

CUS_6172

0.546

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CUS_6171	CUS_6172	Putative membrane protein.	Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.793
CUS_6171	CUS_6173	Putative membrane protein.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.768
CUS_6171	CUS_6174	Putative membrane protein.	Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535; match to protein family HMM PF04138.	0.546
CUS_6171	CUS_6175	Putative membrane protein.	Hypothetical protein.	0.546
CUS_6171	CUS_6176	Putative membrane protein.	Hypothetical protein; Identified by glimmer; putative.	0.546
CUS_6171	CUS_6177	Putative membrane protein.	Hypothetical protein; Identified by glimmer; putative.	0.409
CUS_6172	CUS_6171	Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Putative membrane protein.	0.793
CUS_6172	CUS_6173	Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.768
CUS_6172	CUS_6174	Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535; match to protein family HMM PF04138.	0.546
CUS_6172	CUS_6175	Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein.	0.546
CUS_6172	CUS_6176	Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein; Identified by glimmer; putative.	0.546
CUS_6172	CUS_6177	Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein; Identified by glimmer; putative.	0.409
CUS_6173	CUS_6171	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Putative membrane protein.	0.768
CUS_6173	CUS_6172	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.768
CUS_6173	CUS_6174	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535; match to protein family HMM PF04138.	0.550
CUS_6173	CUS_6175	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein.	0.550
CUS_6173	CUS_6176	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein; Identified by glimmer; putative.	0.550
CUS_6173	CUS_6177	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein; Identified by glimmer; putative.	0.412
CUS_6174	CUS_6171	Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535; match to protein family HMM PF04138.	Putative membrane protein.	0.546
CUS_6174	CUS_6172	Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535; match to protein family HMM PF04138.	Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.546