CUS_6221 protein (Ruminococcus albus 8) - STRING interaction network

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Score

CUS_6221

RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937. (265 aa)

Predicted Functional Partners:

CUS_7805

0.897

rpoB

0.851

rpoC

0.834

rpoA

0.823

CUS_5811

0.818

CUS_7061

0.811

CUS_5104

0.808

CUS_5287

0.808

CUS_7692

0.775

CUS_6220

0.773

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_5104	CUS_5287	CUS_5104	CUS_5287	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.996
CUS_5104	CUS_6221	CUS_5104	CUS_6221	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	0.808
CUS_5104	CUS_7692	CUS_5104	CUS_7692	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF00990.	0.531
CUS_5104	CUS_7805	CUS_5104	CUS_7805	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	Transcriptional regulator, MerR family; Identified by match to protein family HMM PF00376.	0.591
CUS_5287	CUS_5104	CUS_5287	CUS_5104	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.996
CUS_5287	CUS_6221	CUS_5287	CUS_6221	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	0.808
CUS_5287	CUS_7692	CUS_5287	CUS_7692	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF00990.	0.462
CUS_5287	CUS_7805	CUS_5287	CUS_7805	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	Transcriptional regulator, MerR family; Identified by match to protein family HMM PF00376.	0.591
CUS_5811	CUS_6221	CUS_5811	CUS_6221	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	0.818
CUS_5811	CUS_7061	CUS_5811	CUS_7061	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	CarD-like protein.	0.866
CUS_5811	CUS_7692	CUS_5811	CUS_7692	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF00990.	0.808
CUS_5811	CUS_7805	CUS_5811	CUS_7805	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Transcriptional regulator, MerR family; Identified by match to protein family HMM PF00376.	0.914
CUS_5811	rpoA	CUS_5811	CUS_6485	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	RNA polymerase, alpha subunit C-terminal domain protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.995
CUS_5811	rpoB	CUS_5811	CUS_7658	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.993
CUS_5811	rpoC	CUS_5811	CUS_7659	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.986
CUS_6220	CUS_6221	CUS_6220	CUS_6221	Hypothetical protein; Identified by glimmer; putative.	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	0.773
CUS_6221	CUS_5104	CUS_6221	CUS_5104	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.808
CUS_6221	CUS_5287	CUS_6221	CUS_5287	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.808
CUS_6221	CUS_5811	CUS_6221	CUS_5811	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.818
CUS_6221	CUS_6220	CUS_6221	CUS_6220	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	Hypothetical protein; Identified by glimmer; putative.	0.773