CUS_6221 protein (Ruminococcus albus 8) - STRING interaction network

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Score

CUS_6221

RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937. (265 aa)

Predicted Functional Partners:

CUS_7805

0.946

rpoB

0.917

rpoC

0.910

rpoA

0.905

CUS_5811

0.904

CUS_7061

0.899

CUS_7692

0.879

CUS_7547

0.843

CUS_6869

0.790

CUS_7152

0.790

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_5811	CUS_6221	CUS_5811	CUS_6221	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	0.904
CUS_5811	CUS_6869	CUS_5811	CUS_6869	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Transcriptional regulator, Spx/MgsR family; Identified by match to protein family HMM PF03960; match to protein family HMM TIGR01617; Belongs to the ArsC family.	0.742
CUS_5811	CUS_7061	CUS_5811	CUS_7061	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	CarD-like protein.	0.927
CUS_5811	CUS_7152	CUS_5811	CUS_7152	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Identified by match to protein family HMM PF03960; Belongs to the ArsC family.	0.742
CUS_5811	CUS_7692	CUS_5811	CUS_7692	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF00990.	0.907
CUS_5811	CUS_7805	CUS_5811	CUS_7805	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Transcriptional regulator, MerR family; Identified by match to protein family HMM PF00376.	0.938
CUS_5811	rpoA	CUS_5811	CUS_6485	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	RNA polymerase, alpha subunit C-terminal domain protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
CUS_5811	rpoB	CUS_5811	CUS_7658	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
CUS_5811	rpoC	CUS_5811	CUS_7659	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
CUS_6221	CUS_5811	CUS_6221	CUS_5811	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.904
CUS_6221	CUS_6869	CUS_6221	CUS_6869	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	Transcriptional regulator, Spx/MgsR family; Identified by match to protein family HMM PF03960; match to protein family HMM TIGR01617; Belongs to the ArsC family.	0.790
CUS_6221	CUS_7061	CUS_6221	CUS_7061	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	CarD-like protein.	0.899
CUS_6221	CUS_7152	CUS_6221	CUS_7152	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	Identified by match to protein family HMM PF03960; Belongs to the ArsC family.	0.790
CUS_6221	CUS_7547	CUS_6221	CUS_7547	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311; match to protein family HMM PF07883.	0.843
CUS_6221	CUS_7692	CUS_6221	CUS_7692	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF00990.	0.879
CUS_6221	CUS_7805	CUS_6221	CUS_7805	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	Transcriptional regulator, MerR family; Identified by match to protein family HMM PF00376.	0.946
CUS_6221	rpoA	CUS_6221	CUS_6485	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	RNA polymerase, alpha subunit C-terminal domain protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.905
CUS_6221	rpoB	CUS_6221	CUS_7658	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.917
CUS_6221	rpoC	CUS_6221	CUS_7659	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.910
CUS_6869	CUS_5811	CUS_6869	CUS_5811	Transcriptional regulator, Spx/MgsR family; Identified by match to protein family HMM PF03960; match to protein family HMM TIGR01617; Belongs to the ArsC family.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.742