Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CUS_6229N-acylglucosamine 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man). (387 aa)    
Predicted Functional Partners:
CUS_5821
Hypothetical protein; Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man-Glc) to mannose 1-phosphate (Man1P) and glucose; Belongs to the glycosyl hydrolase 130 family.
 
   
 0.933
CUS_6335
Putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883.
    
 0.906
CUS_6421
Identified by match to protein family HMM PF04041.
 
   
 0.821
CUS_6349
Hypothetical protein.
 
     0.708
CUS_6129
ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.
 
   
 0.703
CUS_7209
Identified by match to protein family HMM PF03629.
 
     0.696
CUS_7614
Identified by match to protein family HMM PF03629.
 
     0.676
CUS_7424
Glycosyl hydrolase family 26; Identified by match to protein family HMM PF02156; Belongs to the glycosyl hydrolase 26 family.
 
     0.627
CUS_5002
Glycosyl hydrolase family 26; Identified by match to protein family HMM PF02156; Belongs to the glycosyl hydrolase 26 family.
 
     0.620
CUS_6906
Identified by match to protein family HMM PF00041; match to protein family HMM PF00657; match to protein family HMM PF02156; Belongs to the glycosyl hydrolase 26 family.
 
     0.618
Your Current Organism:
Ruminococcus albus 8
NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8
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