CUS_6367 protein (Ruminococcus albus 8) - STRING interaction network

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Score

CUS_6367

Identified by match to protein family HMM PF00436. (109 aa)

Predicted Functional Partners:

CUS_6368

0.757

priA

0.724

dnaX

0.683

rpsF

0.676

CUS_5849

0.672

rplK

0.632

rpsB

0.626

rpsG

0.613

rpsJ

0.604

rplU

0.603

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_5849	CUS_6367	CUS_5849	CUS_6367	Hypothetical protein.	Identified by match to protein family HMM PF00436.	0.672
CUS_5849	dnaX	CUS_5849	CUS_5243	Hypothetical protein.	DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.876
CUS_6367	CUS_5849	CUS_6367	CUS_5849	Identified by match to protein family HMM PF00436.	Hypothetical protein.	0.672
CUS_6367	CUS_6368	CUS_6367	CUS_6368	Identified by match to protein family HMM PF00436.	Hypothetical protein; Identified by glimmer; putative.	0.757
CUS_6367	dnaX	CUS_6367	CUS_5243	Identified by match to protein family HMM PF00436.	DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.683
CUS_6367	priA	CUS_6367	CUS_5812	Identified by match to protein family HMM PF00436.	Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.	0.724
CUS_6367	rplK	CUS_6367	CUS_8154	Identified by match to protein family HMM PF00436.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.632
CUS_6367	rplU	CUS_6367	CUS_5404	Identified by match to protein family HMM PF00436.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.603
CUS_6367	rpsB	CUS_6367	CUS_6806	Identified by match to protein family HMM PF00436.	Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family.	0.626
CUS_6367	rpsF	CUS_6367	CUS_6066	Identified by match to protein family HMM PF00436.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.676
CUS_6367	rpsG	CUS_6367	CUS_7661	Identified by match to protein family HMM PF00436.	Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.613
CUS_6367	rpsJ	CUS_6367	CUS_6515	Identified by match to protein family HMM PF00436.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.604
CUS_6368	CUS_6367	CUS_6368	CUS_6367	Hypothetical protein; Identified by glimmer; putative.	Identified by match to protein family HMM PF00436.	0.757
dnaX	CUS_5849	CUS_5243	CUS_5849	DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	Hypothetical protein.	0.876
dnaX	CUS_6367	CUS_5243	CUS_6367	DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	Identified by match to protein family HMM PF00436.	0.683
dnaX	rpsJ	CUS_5243	CUS_6515	DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.402
priA	CUS_6367	CUS_5812	CUS_6367	Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.	Identified by match to protein family HMM PF00436.	0.724
rplK	CUS_6367	CUS_8154	CUS_6367	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Identified by match to protein family HMM PF00436.	0.632
rplK	rplU	CUS_8154	CUS_5404	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.987
rplK	rpsB	CUS_8154	CUS_6806	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family.	0.989