Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CUS_6386Cellulase (glycosyl hydrolase family 5); Identified by match to protein family HMM PF00150; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (583 aa)    
Predicted Functional Partners:
CUS_7715
Cellulase (glycosyl hydrolase family 5); Identified by match to protein family HMM PF00150; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
  0.886
CUS_6227
Cellulase (glycosyl hydrolase family 5); Identified by match to protein family HMM PF00150; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.839
CUS_7783
Cellulase (glycosyl hydrolase family 5); Identified by match to protein family HMM PF00150; match to protein family HMM PF00404; match to protein family HMM PF02018.
 
  
 0.837
CUS_8100
Cellulase (glycosyl hydrolase family 5); Identified by match to protein family HMM PF00150.
 
  
 0.832
CUS_5279
Dockerin type I repeat protein; Identified by match to protein family HMM PF00404; match to protein family HMM PF02156; Belongs to the glycosyl hydrolase 26 family.
  
  
 0.823
CUS_8158
Cellulase (glycosyl hydrolase family 5); Identified by match to protein family HMM PF00150; match to protein family HMM PF00553.
 
  
 0.823
CUS_7424
Glycosyl hydrolase family 26; Identified by match to protein family HMM PF02156; Belongs to the glycosyl hydrolase 26 family.
  
  
 0.813
CUS_6444
Glycosyl hydrolase family 26; Identified by match to protein family HMM PF02156; Belongs to the glycosyl hydrolase 26 family.
  
  
 0.811
CUS_5609
Cellulase (glycosyl hydrolase family 5); Identified by match to protein family HMM PF00150; match to protein family HMM PF00404; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.794
CUS_5002
Glycosyl hydrolase family 26; Identified by match to protein family HMM PF02156; Belongs to the glycosyl hydrolase 26 family.
  
  
 0.793
Your Current Organism:
Ruminococcus albus 8
NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8
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