STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUS_6471ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547. (935 aa)    
Predicted Functional Partners:
CUS_6470
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  0.973
CUS_6469
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  0.952
CUS_6465
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  0.949
CUS_6464
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  0.908
CUS_6468
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF01436; match to protein family HMM PF07719.
 
     0.898
CUS_6467
Conserved domain protein.
 
    0.897
CUS_6466
Conserved domain protein.
 
     0.891
CUS_7033
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  0.887
CUS_7037
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  0.854
CUS_7034
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
  0.833
Your Current Organism:
Ruminococcus albus 8
NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8
Server load: low (22%) [HD]