CUS_6473 protein (Ruminococcus albus 8) - STRING interaction network

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second shell of interactors

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

CUS_6473

ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (225 aa)

Predicted Functional Partners:

CUS_5503

0.954

CUS_7471

0.954

CUS_7752

0.951

CUS_5508

0.946

CUS_5174

0.931

CUS_6813

0.897

CUS_6472

0.805

CUS_7286

0.706

CUS_7283

0.633

CUS_5862

0.612

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CUS_5174	CUS_6472	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Putative lipoprotein ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.846
CUS_5174	CUS_6473	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.931
CUS_5174	CUS_7283	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	0.765
CUS_5503	CUS_6472	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Putative lipoprotein ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.954
CUS_5503	CUS_6473	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.954
CUS_5503	CUS_7283	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	0.789
CUS_5503	CUS_7471	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687; match to protein family HMM PF06696.	0.709
CUS_5503	CUS_7752	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.511
CUS_5508	CUS_6472	Efflux ABC transporter, permease protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02687.	Putative lipoprotein ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.865
CUS_5508	CUS_6473	Efflux ABC transporter, permease protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02687.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.946
CUS_5508	CUS_7283	Efflux ABC transporter, permease protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02687.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	0.768
CUS_5862	CUS_6472	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Putative lipoprotein ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.592
CUS_5862	CUS_6473	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.612
CUS_6472	CUS_5174	Putative lipoprotein ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.846
CUS_6472	CUS_5503	Putative lipoprotein ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.954
CUS_6472	CUS_5508	Putative lipoprotein ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux ABC transporter, permease protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02687.	0.865
CUS_6472	CUS_5862	Putative lipoprotein ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.592
CUS_6472	CUS_6473	Putative lipoprotein ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.805
CUS_6472	CUS_7283	Putative lipoprotein ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	0.776
CUS_6472	CUS_7286	Putative lipoprotein ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.888