Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUS_5533 | CUS_5822 | CUS_5533 | CUS_5822 | Identified by match to protein family HMM PF00082; match to protein family HMM PF06280. | Identified by match to protein family HMM PF04203. | 0.405 |
CUS_5533 | CUS_5823 | CUS_5533 | CUS_5823 | Identified by match to protein family HMM PF00082; match to protein family HMM PF06280. | LPXTG-motif cell wall anchor domain protein; Identified by match to protein family HMM TIGR01167. | 0.779 |
CUS_5533 | CUS_6667 | CUS_5533 | CUS_6667 | Identified by match to protein family HMM PF00082; match to protein family HMM PF06280. | LPXTG-motif cell wall anchor domain protein. | 0.779 |
CUS_5533 | CUS_6668 | CUS_5533 | CUS_6668 | Identified by match to protein family HMM PF00082; match to protein family HMM PF06280. | LPXTG-motif cell wall anchor domain protein; Identified by match to protein family HMM TIGR01167. | 0.779 |
CUS_5533 | CUS_6669 | CUS_5533 | CUS_6669 | Identified by match to protein family HMM PF00082; match to protein family HMM PF06280. | Sortase family protein. | 0.405 |
CUS_5533 | CUS_7377 | CUS_5533 | CUS_7377 | Identified by match to protein family HMM PF00082; match to protein family HMM PF06280. | Cna protein B-type domain protein; Identified by match to protein family HMM PF05738. | 0.779 |
CUS_5822 | CUS_5533 | CUS_5822 | CUS_5533 | Identified by match to protein family HMM PF04203. | Identified by match to protein family HMM PF00082; match to protein family HMM PF06280. | 0.405 |
CUS_5822 | CUS_5823 | CUS_5822 | CUS_5823 | Identified by match to protein family HMM PF04203. | LPXTG-motif cell wall anchor domain protein; Identified by match to protein family HMM TIGR01167. | 0.938 |
CUS_5822 | CUS_6668 | CUS_5822 | CUS_6668 | Identified by match to protein family HMM PF04203. | LPXTG-motif cell wall anchor domain protein; Identified by match to protein family HMM TIGR01167. | 0.610 |
CUS_5822 | CUS_6669 | CUS_5822 | CUS_6669 | Identified by match to protein family HMM PF04203. | Sortase family protein. | 0.539 |
CUS_5823 | CUS_5533 | CUS_5823 | CUS_5533 | LPXTG-motif cell wall anchor domain protein; Identified by match to protein family HMM TIGR01167. | Identified by match to protein family HMM PF00082; match to protein family HMM PF06280. | 0.779 |
CUS_5823 | CUS_5822 | CUS_5823 | CUS_5822 | LPXTG-motif cell wall anchor domain protein; Identified by match to protein family HMM TIGR01167. | Identified by match to protein family HMM PF04203. | 0.938 |
CUS_5823 | CUS_6668 | CUS_5823 | CUS_6668 | LPXTG-motif cell wall anchor domain protein; Identified by match to protein family HMM TIGR01167. | LPXTG-motif cell wall anchor domain protein; Identified by match to protein family HMM TIGR01167. | 0.735 |
CUS_5823 | CUS_6669 | CUS_5823 | CUS_6669 | LPXTG-motif cell wall anchor domain protein; Identified by match to protein family HMM TIGR01167. | Sortase family protein. | 0.489 |
CUS_5823 | CUS_7377 | CUS_5823 | CUS_7377 | LPXTG-motif cell wall anchor domain protein; Identified by match to protein family HMM TIGR01167. | Cna protein B-type domain protein; Identified by match to protein family HMM PF05738. | 0.419 |
CUS_6667 | CUS_5533 | CUS_6667 | CUS_5533 | LPXTG-motif cell wall anchor domain protein. | Identified by match to protein family HMM PF00082; match to protein family HMM PF06280. | 0.779 |
CUS_6667 | CUS_6668 | CUS_6667 | CUS_6668 | LPXTG-motif cell wall anchor domain protein. | LPXTG-motif cell wall anchor domain protein; Identified by match to protein family HMM TIGR01167. | 0.531 |
CUS_6667 | CUS_6669 | CUS_6667 | CUS_6669 | LPXTG-motif cell wall anchor domain protein. | Sortase family protein. | 0.402 |
CUS_6667 | lepB | CUS_6667 | CUS_6666 | LPXTG-motif cell wall anchor domain protein. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.522 |
CUS_6668 | CUS_5533 | CUS_6668 | CUS_5533 | LPXTG-motif cell wall anchor domain protein; Identified by match to protein family HMM TIGR01167. | Identified by match to protein family HMM PF00082; match to protein family HMM PF06280. | 0.779 |
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