STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUS_6801Glycosyl hydrolase family 2, sugar binding domain protein; Identified by match to protein family HMM PF00703; match to protein family HMM PF02837; Belongs to the glycosyl hydrolase 2 family. (815 aa)    
Predicted Functional Partners:
CUS_7064
Hypothetical protein.
  
  
  0.838
CUS_7372
Glycosyl hydrolase family 2, sugar binding domain protein; Identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; Belongs to the glycosyl hydrolase 2 family.
  
  
 0.818
CUS_6800
Transporter, major facilitator family protein.
       0.752
ara51a
Alpha-L-arabinofuranosidase C-terminal domain protein; Identified by match to protein family HMM PF06964.
 
  
 0.750
CUS_7195
Family 4 glycosyl hydrolase; Identified by match to protein family HMM PF02056.
 
  
  0.749
uxaC
Glucuronate isomerase; Identified by match to protein family HMM PF02614.
  
 
 0.727
CUS_7642
Putative glucokinase; Identified by match to protein family HMM PF00480; match to protein family HMM TIGR00744.
     
 0.715
CUS_6562
Aldose 1-epimerase; Identified by match to protein family HMM PF01263.
  
 
 0.701
CUS_6968
Dockerin type I repeat protein; Identified by match to protein family HMM PF00404.
  
 
 0.700
araD
L-ribulose-5-phosphate 4-epimerase; Identified by match to protein family HMM PF00596; match to protein family HMM TIGR00760.
   
 
  0.692
Your Current Organism:
Ruminococcus albus 8
NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.