STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUS_6878Hypothetical protein; Identified by glimmer; putative. (50 aa)    
Predicted Functional Partners:
CUS_6877
Hypothetical protein; Identified by glimmer; putative.
       0.773
CUS_6879
Conserved domain protein.
       0.620
CUS_6876
Putative serine O-acetyltransferase.
       0.541
CUS_6875
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
       0.495
CUS_6873
Hypothetical protein; Identified by glimmer; putative.
       0.421
rnz
Putative ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
       0.421
CUS_6880
Hypothetical protein; Identified by glimmer; putative.
       0.418
CUS_6881
Hypothetical protein.
       0.418
Your Current Organism:
Ruminococcus albus 8
NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.