CUS_6885 protein (Ruminococcus albus 8) - STRING interaction network

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CUS_6885

ABC-2 type transporter; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01061. (312 aa)

Predicted Functional Partners:

CUS_6884

0.956

CUS_7748

0.905

CUS_5153

0.899

CUS_5818

0.899

CUS_5106

0.804

CUS_7923

0.804

ribA

0.782

add

0.773

CUS_6548

0.742

CUS_5104

0.628

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_5104	CUS_5106	CUS_5104	CUS_5106	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	0.999
CUS_5104	CUS_6884	CUS_5104	CUS_6884	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.628
CUS_5104	CUS_6885	CUS_5104	CUS_6885	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	ABC-2 type transporter; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01061.	0.628
CUS_5104	CUS_7748	CUS_5104	CUS_7748	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	Hypothetical protein.	0.999
CUS_5104	CUS_7923	CUS_5104	CUS_7923	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	0.999
CUS_5104	ribA	CUS_5104	CUS_5649	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.	0.920
CUS_5106	CUS_5104	CUS_5106	CUS_5104	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.999
CUS_5106	CUS_5153	CUS_5106	CUS_5153	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	PASTA domain protein; Identified by match to protein family HMM PF03793.	0.809
CUS_5106	CUS_5818	CUS_5106	CUS_5818	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	Putative serine/threonine-protein kinase PrkC; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163; match to protein family HMM PF03793; match to protein family HMM PF07714.	0.809
CUS_5106	CUS_6884	CUS_5106	CUS_6884	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.804
CUS_5106	CUS_6885	CUS_5106	CUS_6885	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	ABC-2 type transporter; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01061.	0.804
CUS_5106	CUS_7748	CUS_5106	CUS_7748	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	Hypothetical protein.	0.997
CUS_5106	CUS_7923	CUS_5106	CUS_7923	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	0.996
CUS_5106	ribA	CUS_5106	CUS_5649	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.	0.930
CUS_5153	CUS_5106	CUS_5153	CUS_5106	PASTA domain protein; Identified by match to protein family HMM PF03793.	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	0.809
CUS_5153	CUS_5818	CUS_5153	CUS_5818	PASTA domain protein; Identified by match to protein family HMM PF03793.	Putative serine/threonine-protein kinase PrkC; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163; match to protein family HMM PF03793; match to protein family HMM PF07714.	0.456
CUS_5153	CUS_6548	CUS_5153	CUS_6548	PASTA domain protein; Identified by match to protein family HMM PF03793.	Penicillin-binding protein, transpeptidase domain protein; Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF03793.	0.713
CUS_5153	CUS_6884	CUS_5153	CUS_6884	PASTA domain protein; Identified by match to protein family HMM PF03793.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.898
CUS_5153	CUS_6885	CUS_5153	CUS_6885	PASTA domain protein; Identified by match to protein family HMM PF03793.	ABC-2 type transporter; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01061.	0.899
CUS_5153	CUS_7748	CUS_5153	CUS_7748	PASTA domain protein; Identified by match to protein family HMM PF03793.	Hypothetical protein.	0.921

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