gcdC protein (Ruminococcus albus 8) - STRING interaction network

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Score

gcdC

glutaconyl-CoA decarboxylase subunit gamma; Identified by match to protein family HMM PF00364. (124 aa)

Predicted Functional Partners:

CUS_6890

0.999

CUS_6888

0.998

gcdB

0.980

birA

0.966

nifJ

0.960

accB

0.958

CUS_5645

0.948

CUS_5811

0.924

CUS_7561

0.909

accA

0.906

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_5645	CUS_6890	CUS_5645	CUS_6890	Beta-ketoacyl synthase, N-terminal domain protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF02801.	Carboxyl transferase domain protein; Identified by match to protein family HMM PF01039.	0.979
CUS_5645	accA	CUS_5645	CUS_6442	Beta-ketoacyl synthase, N-terminal domain protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF02801.	acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.	0.891
CUS_5645	accB	CUS_5645	CUS_6434	Beta-ketoacyl synthase, N-terminal domain protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF02801.	acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.	0.945
CUS_5645	birA	CUS_5645	CUS_7358	Beta-ketoacyl synthase, N-terminal domain protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF02801.	biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.	0.663
CUS_5645	gcdC	CUS_5645	CUS_6889	Beta-ketoacyl synthase, N-terminal domain protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF02801.	glutaconyl-CoA decarboxylase subunit gamma; Identified by match to protein family HMM PF00364.	0.948
CUS_5645	nifJ	CUS_5645	CUS_6517	Beta-ketoacyl synthase, N-terminal domain protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF02801.	Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.	0.921
CUS_5811	gcdC	CUS_5811	CUS_6889	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	glutaconyl-CoA decarboxylase subunit gamma; Identified by match to protein family HMM PF00364.	0.924
CUS_6888	CUS_6890	CUS_6888	CUS_6890	methylmalonyl-CoA carboxyltransferase 5S subunit; Identified by match to protein family HMM PF00682; match to protein family HMM PF02436.	Carboxyl transferase domain protein; Identified by match to protein family HMM PF01039.	0.831
CUS_6888	accA	CUS_6888	CUS_6442	methylmalonyl-CoA carboxyltransferase 5S subunit; Identified by match to protein family HMM PF00682; match to protein family HMM PF02436.	acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.	0.832
CUS_6888	accB	CUS_6888	CUS_6434	methylmalonyl-CoA carboxyltransferase 5S subunit; Identified by match to protein family HMM PF00682; match to protein family HMM PF02436.	acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.	0.951
CUS_6888	birA	CUS_6888	CUS_7358	methylmalonyl-CoA carboxyltransferase 5S subunit; Identified by match to protein family HMM PF00682; match to protein family HMM PF02436.	biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.	0.674
CUS_6888	gcdB	CUS_6888	CUS_7562	methylmalonyl-CoA carboxyltransferase 5S subunit; Identified by match to protein family HMM PF00682; match to protein family HMM PF02436.	glutaconyl-CoA decarboxylase subunit beta; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).	0.989
CUS_6888	gcdC	CUS_6888	CUS_6889	methylmalonyl-CoA carboxyltransferase 5S subunit; Identified by match to protein family HMM PF00682; match to protein family HMM PF02436.	glutaconyl-CoA decarboxylase subunit gamma; Identified by match to protein family HMM PF00364.	0.998
CUS_6888	nifJ	CUS_6888	CUS_6517	methylmalonyl-CoA carboxyltransferase 5S subunit; Identified by match to protein family HMM PF00682; match to protein family HMM PF02436.	Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.	0.966
CUS_6890	CUS_5645	CUS_6890	CUS_5645	Carboxyl transferase domain protein; Identified by match to protein family HMM PF01039.	Beta-ketoacyl synthase, N-terminal domain protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF02801.	0.979
CUS_6890	CUS_6888	CUS_6890	CUS_6888	Carboxyl transferase domain protein; Identified by match to protein family HMM PF01039.	methylmalonyl-CoA carboxyltransferase 5S subunit; Identified by match to protein family HMM PF00682; match to protein family HMM PF02436.	0.831
CUS_6890	accA	CUS_6890	CUS_6442	Carboxyl transferase domain protein; Identified by match to protein family HMM PF01039.	acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.	0.841
CUS_6890	accB	CUS_6890	CUS_6434	Carboxyl transferase domain protein; Identified by match to protein family HMM PF01039.	acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.	0.854
CUS_6890	birA	CUS_6890	CUS_7358	Carboxyl transferase domain protein; Identified by match to protein family HMM PF01039.	biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.	0.999
CUS_6890	gcdB	CUS_6890	CUS_7562	Carboxyl transferase domain protein; Identified by match to protein family HMM PF01039.	glutaconyl-CoA decarboxylase subunit beta; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).	0.859