CUS_6904 protein (Ruminococcus albus 8) - STRING interaction network

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Score

CUS_6904

Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165. (738 aa)

Predicted Functional Partners:

CUS_7748

0.960

CUS_5106

0.945

CUS_7923

0.945

CUS_7978

0.801

CUS_7153

0.796

CUS_6905

0.773

CUS_6688

0.767

CUS_5269

0.761

CUS_5644

0.732

CUS_6122

0.732

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CUS_5106	CUS_6904	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.	0.945
CUS_5106	CUS_7153	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08281.	0.983
CUS_5106	CUS_7748	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	Hypothetical protein.	0.998
CUS_5106	CUS_7923	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	0.997
CUS_5106	CUS_7978	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	Transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04967.	0.983
CUS_5269	CUS_5644	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	0.672
CUS_5269	CUS_6122	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	0.672
CUS_5269	CUS_6904	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.	0.761
CUS_5644	CUS_5269	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	0.672
CUS_5644	CUS_6122	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	0.999
CUS_5644	CUS_6688	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	Putative catabolite control protein A; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	0.672
CUS_5644	CUS_6904	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.	0.732
CUS_5644	CUS_7748	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	Hypothetical protein.	0.403
CUS_6122	CUS_5269	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	0.672
CUS_6122	CUS_5644	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	0.999
CUS_6122	CUS_6688	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	Putative catabolite control protein A; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	0.672
CUS_6122	CUS_6904	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.	0.732
CUS_6122	CUS_7748	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	Hypothetical protein.	0.403
CUS_6688	CUS_5644	Putative catabolite control protein A; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	0.672
CUS_6688	CUS_6122	Putative catabolite control protein A; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	0.672