CUS_6928 protein (Ruminococcus albus 8) - STRING interaction network

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CUS_6928

Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF07136. (325 aa)

Predicted Functional Partners:

prmC

0.954

CUS_6927

0.818

CUS_6926

0.789

CUS_6930

0.773

CUS_6931

0.678

speB

0.659

speB-2

0.659

CUS_6925

0.624

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_6925	CUS_6926	CUS_6925	CUS_6926	Conserved domain protein.	Putative sensory transduction protein RegX3; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.790
CUS_6925	CUS_6927	CUS_6925	CUS_6927	Conserved domain protein.	Putative alkaline phosphatase synthesis sensor protein PhoR; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.899
CUS_6925	CUS_6928	CUS_6925	CUS_6928	Conserved domain protein.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF07136.	0.624
CUS_6925	CUS_6930	CUS_6925	CUS_6930	Conserved domain protein.	Identified by match to protein family HMM PF00300.	0.612
CUS_6925	CUS_6931	CUS_6925	CUS_6931	Conserved domain protein.	Hypothetical protein; Identified by glimmer; putative.	0.471
CUS_6925	prmC	CUS_6925	CUS_6929	Conserved domain protein.	protein-(glutamine-N5) methyltransferase, release factor-specific; Identified by match to protein family HMM TIGR00536; match to protein family HMM TIGR03534.	0.623
CUS_6926	CUS_6925	CUS_6926	CUS_6925	Putative sensory transduction protein RegX3; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Conserved domain protein.	0.790
CUS_6926	CUS_6927	CUS_6926	CUS_6927	Putative sensory transduction protein RegX3; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Putative alkaline phosphatase synthesis sensor protein PhoR; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.972
CUS_6926	CUS_6928	CUS_6926	CUS_6928	Putative sensory transduction protein RegX3; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF07136.	0.789
CUS_6926	CUS_6930	CUS_6926	CUS_6930	Putative sensory transduction protein RegX3; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Identified by match to protein family HMM PF00300.	0.737
CUS_6926	CUS_6931	CUS_6926	CUS_6931	Putative sensory transduction protein RegX3; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Hypothetical protein; Identified by glimmer; putative.	0.647
CUS_6926	prmC	CUS_6926	CUS_6929	Putative sensory transduction protein RegX3; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	protein-(glutamine-N5) methyltransferase, release factor-specific; Identified by match to protein family HMM TIGR00536; match to protein family HMM TIGR03534.	0.777
CUS_6927	CUS_6925	CUS_6927	CUS_6925	Putative alkaline phosphatase synthesis sensor protein PhoR; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Conserved domain protein.	0.899
CUS_6927	CUS_6926	CUS_6927	CUS_6926	Putative alkaline phosphatase synthesis sensor protein PhoR; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Putative sensory transduction protein RegX3; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.972
CUS_6927	CUS_6928	CUS_6927	CUS_6928	Putative alkaline phosphatase synthesis sensor protein PhoR; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF07136.	0.818
CUS_6927	CUS_6930	CUS_6927	CUS_6930	Putative alkaline phosphatase synthesis sensor protein PhoR; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Identified by match to protein family HMM PF00300.	0.773
CUS_6927	CUS_6931	CUS_6927	CUS_6931	Putative alkaline phosphatase synthesis sensor protein PhoR; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Hypothetical protein; Identified by glimmer; putative.	0.678
CUS_6927	prmC	CUS_6927	CUS_6929	Putative alkaline phosphatase synthesis sensor protein PhoR; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	protein-(glutamine-N5) methyltransferase, release factor-specific; Identified by match to protein family HMM TIGR00536; match to protein family HMM TIGR03534.	0.818
CUS_6928	CUS_6925	CUS_6928	CUS_6925	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF07136.	Conserved domain protein.	0.624
CUS_6928	CUS_6926	CUS_6928	CUS_6926	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF07136.	Putative sensory transduction protein RegX3; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.789

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