Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CUS_6970Cellulase (glycosyl hydrolase family 5); Identified by match to protein family HMM PF00150; match to protein family HMM PF00404. (676 aa)    
Predicted Functional Partners:
CUS_8158
Cellulase (glycosyl hydrolase family 5); Identified by match to protein family HMM PF00150; match to protein family HMM PF00553.
  
  
  0.854
CUS_6520
BNR/Asp-box repeat protein; Identified by match to protein family HMM PF02012.
  
 
 0.848
CUS_6909
Putative cellulase 1; Identified by match to protein family HMM PF00759; match to protein family HMM PF02018; match to protein family HMM PF02927.
  
  0.838
CUS_6119
Putative cellulase 1; Identified by match to protein family HMM PF00041; match to protein family HMM PF00759; match to protein family HMM PF02018; match to protein family HMM PF02927.
  
  0.836
CUS_7090
Putative endoglucanase C; Identified by match to protein family HMM PF00759; match to protein family HMM PF02018; match to protein family HMM PF02927.
  
  0.834
CUS_5609
Cellulase (glycosyl hydrolase family 5); Identified by match to protein family HMM PF00150; match to protein family HMM PF00404; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.832
CUS_6741
Cellulase (glycosyl hydrolase family 5); Identified by match to protein family HMM PF00150; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.832
CUS_6091
Putative cellulase; Identified by match to protein family HMM PF00041; match to protein family HMM PF00150.
  
  
  0.828
CUS_5444
Ricin-type beta-trefoil lectin domain protein; Identified by match to protein family HMM PF00652; match to protein family HMM PF00657; match to protein family HMM PF01839.
  
  0.807
CUS_8160
FG-GAP repeat protein; Identified by match to protein family HMM PF00041.
  
  0.800
Your Current Organism:
Ruminococcus albus 8
NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8
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