STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUS_7010Hypothetical protein. (255 aa)    
Predicted Functional Partners:
CUS_5706
Conserved domain protein.
  
     0.769
CUS_7602
Hypothetical protein; Identified by glimmer; putative.
  
     0.745
CUS_7605
Hypothetical protein; Identified by glimmer; putative.
  
     0.742
CUS_7601
Hypothetical protein; Identified by glimmer; putative.
  
     0.741
CUS_7290
Conserved domain protein.
  
     0.691
CUS_4969
Hypothetical protein.
  
     0.645
CUS_8123
Hypothetical protein; Identified by glimmer; putative.
  
     0.637
CUS_7522
Hypothetical protein.
  
     0.606
CUS_5800
S1 RNA binding domain protein; Identified by match to protein family HMM PF00575.
  
     0.605
CUS_5308
Conserved domain protein.
  
     0.574
Your Current Organism:
Ruminococcus albus 8
NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.