CUS_7036 protein (Ruminococcus albus 8) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CUS_7036

Conserved domain protein. (753 aa)

Predicted Functional Partners:

CUS_7035

0.950

CUS_7032

0.930

CUS_7037

0.926

CUS_7033

0.921

CUS_7034

0.895

CUS_7039

0.876

CUS_5422

0.793

CUS_7038

0.793

CUS_7293

0.793

CUS_8074

0.793

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CUS_5422	CUS_7036	Conserved domain protein; Overlaps another CDS with the same product name.	Conserved domain protein.	0.793
CUS_7032	CUS_7033	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.971
CUS_7032	CUS_7034	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.963
CUS_7032	CUS_7035	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	NHL repeat protein; Identified by match to protein family HMM PF01436.	0.928
CUS_7032	CUS_7036	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	Conserved domain protein.	0.930
CUS_7032	CUS_7037	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.962
CUS_7032	CUS_7038	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.910
CUS_7032	CUS_7039	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	0.857
CUS_7033	CUS_7032	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	0.971
CUS_7033	CUS_7034	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.982
CUS_7033	CUS_7035	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	NHL repeat protein; Identified by match to protein family HMM PF01436.	0.921
CUS_7033	CUS_7036	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	Conserved domain protein.	0.921
CUS_7033	CUS_7037	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.980
CUS_7033	CUS_7038	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.968
CUS_7033	CUS_7039	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	0.874
CUS_7034	CUS_7032	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	0.963
CUS_7034	CUS_7033	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.982
CUS_7034	CUS_7035	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	NHL repeat protein; Identified by match to protein family HMM PF01436.	0.893
CUS_7034	CUS_7036	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	Conserved domain protein.	0.895
CUS_7034	CUS_7037	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.979