CUS_7472 protein (Ruminococcus albus 8) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

CUS_7472

ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (234 aa)

Predicted Functional Partners:

CUS_7471

0.997

CUS_5503

0.989

CUS_7752

0.951

CUS_6812

0.885

CUS_5587

0.881

CUS_5508

0.873

CUS_5174

0.870

CUS_7113

0.693

CUS_7083

0.639

CUS_6769

0.555

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CUS_5174	CUS_7472	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.870
CUS_5503	CUS_7113	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.563
CUS_5503	CUS_7471	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687; match to protein family HMM PF06696.	0.709
CUS_5503	CUS_7472	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.989
CUS_5503	CUS_7752	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.511
CUS_5508	CUS_7472	Efflux ABC transporter, permease protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02687.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.873
CUS_5587	CUS_7472	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.881
CUS_6769	CUS_7472	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.555
CUS_6812	CUS_7472	ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005; match to protein family HMM PF02463.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.885
CUS_7083	CUS_7472	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.639
CUS_7113	CUS_5503	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.563
CUS_7113	CUS_7471	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687; match to protein family HMM PF06696.	0.570
CUS_7113	CUS_7472	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.693
CUS_7471	CUS_5503	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687; match to protein family HMM PF06696.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.709
CUS_7471	CUS_7113	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687; match to protein family HMM PF06696.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.570
CUS_7471	CUS_7472	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687; match to protein family HMM PF06696.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.997
CUS_7471	CUS_7752	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687; match to protein family HMM PF06696.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.511
CUS_7472	CUS_5174	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.870
CUS_7472	CUS_5503	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.989
CUS_7472	CUS_5508	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux ABC transporter, permease protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02687.	0.873