STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUS_7551Hypothetical protein. (279 aa)    
Predicted Functional Partners:
CUS_7552
Hypothetical protein.
 
  
 0.981
CUS_7553
Hypothetical protein.
 
  
 0.946
CUS_6598
Zinc finger domain protein, LSD1 subclass.
 
  
 0.923
CUS_8013
Conserved domain protein.
 
     0.721
CUS_4458
Hypothetical protein.
 
  
 0.670
CUS_7977
PAS domain S-box protein.
  
     0.489
CUS_6044
Hypothetical protein.
  
  
 0.457
CUS_7976
Conserved domain protein.
 
     0.452
CUS_7555
Conserved domain protein.
       0.400
Your Current Organism:
Ruminococcus albus 8
NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.