cadA protein (Ruminococcus albus 8) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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cadA

Cadmium-exporting ATPase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525. (618 aa)

Predicted Functional Partners:

CUS_7576

0.905

CUS_7579

0.875

CUS_5991

0.616

CUS_4440

0.598

CUS_7625

0.598

nifJ

0.458

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_4440	CUS_5991	CUS_4440	CUS_5991	Hypothetical protein.	Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.	0.652
CUS_4440	cadA	CUS_4440	CUS_7580	Hypothetical protein.	Cadmium-exporting ATPase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525.	0.598
CUS_5991	CUS_4440	CUS_5991	CUS_4440	Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.	Hypothetical protein.	0.652
CUS_5991	CUS_7576	CUS_5991	CUS_7576	Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.	Putative cadmium efflux system accessory protein; Identified by match to protein family HMM PF01022.	0.550
CUS_5991	CUS_7579	CUS_5991	CUS_7579	Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.	Heavy metal-associated domain protein; Identified by match to protein family HMM PF00403.	0.579
CUS_5991	CUS_7625	CUS_5991	CUS_7625	Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.	Heavy metal-binding family protein.	0.652
CUS_5991	cadA	CUS_5991	CUS_7580	Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.	Cadmium-exporting ATPase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525.	0.616
CUS_5991	nifJ	CUS_5991	CUS_6517	Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.	Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.	0.536
CUS_7576	CUS_5991	CUS_7576	CUS_5991	Putative cadmium efflux system accessory protein; Identified by match to protein family HMM PF01022.	Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.	0.550
CUS_7576	CUS_7579	CUS_7576	CUS_7579	Putative cadmium efflux system accessory protein; Identified by match to protein family HMM PF01022.	Heavy metal-associated domain protein; Identified by match to protein family HMM PF00403.	0.759
CUS_7576	cadA	CUS_7576	CUS_7580	Putative cadmium efflux system accessory protein; Identified by match to protein family HMM PF01022.	Cadmium-exporting ATPase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525.	0.905
CUS_7579	CUS_5991	CUS_7579	CUS_5991	Heavy metal-associated domain protein; Identified by match to protein family HMM PF00403.	Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.	0.579
CUS_7579	CUS_7576	CUS_7579	CUS_7576	Heavy metal-associated domain protein; Identified by match to protein family HMM PF00403.	Putative cadmium efflux system accessory protein; Identified by match to protein family HMM PF01022.	0.759
CUS_7579	cadA	CUS_7579	CUS_7580	Heavy metal-associated domain protein; Identified by match to protein family HMM PF00403.	Cadmium-exporting ATPase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525.	0.875
CUS_7625	CUS_5991	CUS_7625	CUS_5991	Heavy metal-binding family protein.	Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.	0.652
CUS_7625	cadA	CUS_7625	CUS_7580	Heavy metal-binding family protein.	Cadmium-exporting ATPase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525.	0.598
cadA	CUS_4440	CUS_7580	CUS_4440	Cadmium-exporting ATPase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525.	Hypothetical protein.	0.598
cadA	CUS_5991	CUS_7580	CUS_5991	Cadmium-exporting ATPase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525.	Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.	0.616
cadA	CUS_7576	CUS_7580	CUS_7576	Cadmium-exporting ATPase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525.	Putative cadmium efflux system accessory protein; Identified by match to protein family HMM PF01022.	0.905
cadA	CUS_7579	CUS_7580	CUS_7579	Cadmium-exporting ATPase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525.	Heavy metal-associated domain protein; Identified by match to protein family HMM PF00403.	0.875

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