CUS_7692 protein (Ruminococcus albus 8) - STRING interaction network

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Score

CUS_7692

Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF00990. (282 aa)

Predicted Functional Partners:

rpoA

0.908

nifJ

0.842

rpoB

0.825

CUS_5811

0.808

rpoC

0.808

rpoD

0.775

CUS_6221

0.775

CUS_7547

0.700

CUS_7182

0.699

CUS_7693

0.697

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_5811	CUS_6221	CUS_5811	CUS_6221	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	0.818
CUS_5811	CUS_7692	CUS_5811	CUS_7692	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF00990.	0.808
CUS_5811	rpoA	CUS_5811	CUS_6485	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	RNA polymerase, alpha subunit C-terminal domain protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.995
CUS_5811	rpoB	CUS_5811	CUS_7658	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.993
CUS_5811	rpoC	CUS_5811	CUS_7659	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.986
CUS_5811	rpoD	CUS_5811	CUS_6158	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.911
CUS_6221	CUS_5811	CUS_6221	CUS_5811	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.818
CUS_6221	CUS_7547	CUS_6221	CUS_7547	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311; match to protein family HMM PF07883.	0.711
CUS_6221	CUS_7692	CUS_6221	CUS_7692	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF00990.	0.775
CUS_6221	rpoA	CUS_6221	CUS_6485	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	RNA polymerase, alpha subunit C-terminal domain protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.823
CUS_6221	rpoB	CUS_6221	CUS_7658	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.851
CUS_6221	rpoC	CUS_6221	CUS_7659	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.834
CUS_7182	CUS_7547	CUS_7182	CUS_7547	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311; match to protein family HMM PF07883.	0.933
CUS_7182	CUS_7692	CUS_7182	CUS_7692	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF00990.	0.699
CUS_7182	nifJ	CUS_7182	CUS_6517	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311.	Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.	0.842
CUS_7547	CUS_6221	CUS_7547	CUS_6221	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311; match to protein family HMM PF07883.	RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM TIGR02937.	0.711
CUS_7547	CUS_7182	CUS_7547	CUS_7182	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311; match to protein family HMM PF07883.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311.	0.933
CUS_7547	CUS_7692	CUS_7547	CUS_7692	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311; match to protein family HMM PF07883.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF00990.	0.700
CUS_7547	nifJ	CUS_7547	CUS_6517	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311; match to protein family HMM PF07883.	Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.	0.896
CUS_7547	rpoD	CUS_7547	CUS_6158	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311; match to protein family HMM PF07883.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.711