STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUS_7783Cellulase (glycosyl hydrolase family 5); Identified by match to protein family HMM PF00150; match to protein family HMM PF00404; match to protein family HMM PF02018. (754 aa)    
Predicted Functional Partners:
CUS_8158
Cellulase (glycosyl hydrolase family 5); Identified by match to protein family HMM PF00150; match to protein family HMM PF00553.
 
  
 0.922
CUS_7715
Cellulase (glycosyl hydrolase family 5); Identified by match to protein family HMM PF00150; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.921
CUS_5770
Hypothetical protein.
   
 0.918
CUS_5001
Hypothetical protein.
  
 
  0.910
CUS_6446
Hypothetical protein.
  
 
  0.910
CUS_6909
Putative cellulase 1; Identified by match to protein family HMM PF00759; match to protein family HMM PF02018; match to protein family HMM PF02927.
 
 0.905
CUS_6119
Putative cellulase 1; Identified by match to protein family HMM PF00041; match to protein family HMM PF00759; match to protein family HMM PF02018; match to protein family HMM PF02927.
 
 0.904
CUS_7022
Dockerin type I repeat protein; Identified by match to protein family HMM PF00404; match to protein family HMM PF08757.
  
 
  0.903
CUS_7090
Putative endoglucanase C; Identified by match to protein family HMM PF00759; match to protein family HMM PF02018; match to protein family HMM PF02927.
 
 0.902
CUS_5444
Ricin-type beta-trefoil lectin domain protein; Identified by match to protein family HMM PF00652; match to protein family HMM PF00657; match to protein family HMM PF01839.
 
 0.901
Your Current Organism:
Ruminococcus albus 8
NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.