CUS_7791 protein (Ruminococcus albus 8) - STRING interaction network

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Score

CUS_7791

Radical SAM domain protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03960. (621 aa)

Predicted Functional Partners:

CUS_7792

0.984

CUS_7787

0.604

pap

0.599

CUS_7789

0.519

CUS_7790

0.519

rplS

0.507

CUS_7786

0.484

CUS_5403

0.473

CUS_5719

0.464

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_5403	CUS_7791	CUS_5403	CUS_7791	Identified by match to protein family HMM PF04327.	Radical SAM domain protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03960.	0.473
CUS_5403	rplS	CUS_5403	CUS_7793	Identified by match to protein family HMM PF04327.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.597
CUS_5719	CUS_7791	CUS_5719	CUS_7791	Hypothetical protein; Identified by glimmer; putative.	Radical SAM domain protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03960.	0.464
CUS_5719	CUS_7792	CUS_5719	CUS_7792	Hypothetical protein; Identified by glimmer; putative.	Radical SAM-linked protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM TIGR03936.	0.417
CUS_7786	CUS_7787	CUS_7786	CUS_7787	Vitamin B12 dependent methionine synthase, activation domain protein; Identified by match to protein family HMM PF02965.	Putative methionine synthase; Identified by match to protein family HMM PF00809; match to protein family HMM PF02310; match to protein family HMM PF02574; match to protein family HMM PF02607.	0.988
CUS_7786	CUS_7789	CUS_7786	CUS_7789	Vitamin B12 dependent methionine synthase, activation domain protein; Identified by match to protein family HMM PF02965.	Putative ATP-dependent nuclease subunit B; ATP-dependent DNA helicase.	0.425
CUS_7786	CUS_7790	CUS_7786	CUS_7790	Vitamin B12 dependent methionine synthase, activation domain protein; Identified by match to protein family HMM PF02965.	Putative ATP-dependent nuclease subunit A; ATP-dependent DNA helicase.	0.435
CUS_7786	CUS_7791	CUS_7786	CUS_7791	Vitamin B12 dependent methionine synthase, activation domain protein; Identified by match to protein family HMM PF02965.	Radical SAM domain protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03960.	0.484
CUS_7786	CUS_7792	CUS_7786	CUS_7792	Vitamin B12 dependent methionine synthase, activation domain protein; Identified by match to protein family HMM PF02965.	Radical SAM-linked protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM TIGR03936.	0.475
CUS_7787	CUS_7786	CUS_7787	CUS_7786	Putative methionine synthase; Identified by match to protein family HMM PF00809; match to protein family HMM PF02310; match to protein family HMM PF02574; match to protein family HMM PF02607.	Vitamin B12 dependent methionine synthase, activation domain protein; Identified by match to protein family HMM PF02965.	0.988
CUS_7787	CUS_7789	CUS_7787	CUS_7789	Putative methionine synthase; Identified by match to protein family HMM PF00809; match to protein family HMM PF02310; match to protein family HMM PF02574; match to protein family HMM PF02607.	Putative ATP-dependent nuclease subunit B; ATP-dependent DNA helicase.	0.446
CUS_7787	CUS_7790	CUS_7787	CUS_7790	Putative methionine synthase; Identified by match to protein family HMM PF00809; match to protein family HMM PF02310; match to protein family HMM PF02574; match to protein family HMM PF02607.	Putative ATP-dependent nuclease subunit A; ATP-dependent DNA helicase.	0.477
CUS_7787	CUS_7791	CUS_7787	CUS_7791	Putative methionine synthase; Identified by match to protein family HMM PF00809; match to protein family HMM PF02310; match to protein family HMM PF02574; match to protein family HMM PF02607.	Radical SAM domain protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03960.	0.604
CUS_7787	CUS_7792	CUS_7787	CUS_7792	Putative methionine synthase; Identified by match to protein family HMM PF00809; match to protein family HMM PF02310; match to protein family HMM PF02574; match to protein family HMM PF02607.	Radical SAM-linked protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM TIGR03936.	0.536
CUS_7789	CUS_7786	CUS_7789	CUS_7786	Putative ATP-dependent nuclease subunit B; ATP-dependent DNA helicase.	Vitamin B12 dependent methionine synthase, activation domain protein; Identified by match to protein family HMM PF02965.	0.425
CUS_7789	CUS_7787	CUS_7789	CUS_7787	Putative ATP-dependent nuclease subunit B; ATP-dependent DNA helicase.	Putative methionine synthase; Identified by match to protein family HMM PF00809; match to protein family HMM PF02310; match to protein family HMM PF02574; match to protein family HMM PF02607.	0.446
CUS_7789	CUS_7790	CUS_7789	CUS_7790	Putative ATP-dependent nuclease subunit B; ATP-dependent DNA helicase.	Putative ATP-dependent nuclease subunit A; ATP-dependent DNA helicase.	0.999
CUS_7789	CUS_7791	CUS_7789	CUS_7791	Putative ATP-dependent nuclease subunit B; ATP-dependent DNA helicase.	Radical SAM domain protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03960.	0.519
CUS_7789	CUS_7792	CUS_7789	CUS_7792	Putative ATP-dependent nuclease subunit B; ATP-dependent DNA helicase.	Radical SAM-linked protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM TIGR03936.	0.519
CUS_7790	CUS_7786	CUS_7790	CUS_7786	Putative ATP-dependent nuclease subunit A; ATP-dependent DNA helicase.	Vitamin B12 dependent methionine synthase, activation domain protein; Identified by match to protein family HMM PF02965.	0.435