lepB_1 protein (Ruminococcus albus 8) - STRING interaction network

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Score

lepB_1

Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family. (219 aa)

Predicted Functional Partners:

rnhB

0.833

lepB_2

0.796

ylqF

0.761

CUS_7798

0.748

thrC

0.618

lepA

0.541

rplS

0.520

CUS_5241

0.493

CUS_5727

0.443

CUS_5229

0.442

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_5229	CUS_5241	CUS_5229	CUS_5241	Serine protease Do-like protein; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595.	Trypsin; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595.	0.764
CUS_5229	CUS_5727	CUS_5229	CUS_5727	Serine protease Do-like protein; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595.	Trypsin; Identified by match to protein family HMM PF00089.	0.927
CUS_5229	lepB_1	CUS_5229	CUS_7794	Serine protease Do-like protein; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595.	Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family.	0.442
CUS_5241	CUS_5229	CUS_5241	CUS_5229	Trypsin; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595.	Serine protease Do-like protein; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595.	0.764
CUS_5241	CUS_5727	CUS_5241	CUS_5727	Trypsin; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595.	Trypsin; Identified by match to protein family HMM PF00089.	0.779
CUS_5241	lepB_1	CUS_5241	CUS_7794	Trypsin; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595.	Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family.	0.493
CUS_5727	CUS_5229	CUS_5727	CUS_5229	Trypsin; Identified by match to protein family HMM PF00089.	Serine protease Do-like protein; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595.	0.927
CUS_5727	CUS_5241	CUS_5727	CUS_5241	Trypsin; Identified by match to protein family HMM PF00089.	Trypsin; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595.	0.779
CUS_5727	lepB_1	CUS_5727	CUS_7794	Trypsin; Identified by match to protein family HMM PF00089.	Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family.	0.443
CUS_7798	lepB_1	CUS_7798	CUS_7794	Identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; Belongs to the UPF0102 family.	Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family.	0.748
CUS_7798	lepB_2	CUS_7798	CUS_7795	Identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; Belongs to the UPF0102 family.	Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family.	0.802
CUS_7798	rnhB	CUS_7798	CUS_7797	Identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; Belongs to the UPF0102 family.	Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.828
CUS_7798	rplS	CUS_7798	CUS_7793	Identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; Belongs to the UPF0102 family.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.652
CUS_7798	thrC	CUS_7798	CUS_7799	Identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; Belongs to the UPF0102 family.	Threonine synthase; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR00260.	0.720
CUS_7798	ylqF	CUS_7798	CUS_7796	Identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; Belongs to the UPF0102 family.	Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	0.828
lepA	lepB_1	CUS_5129	CUS_7794	GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.	Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family.	0.541
lepA	lepB_2	CUS_5129	CUS_7795	GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.	Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family.	0.456
lepA	rplS	CUS_5129	CUS_7793	GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.951
lepB_1	CUS_5229	CUS_7794	CUS_5229	Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family.	Serine protease Do-like protein; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595.	0.442
lepB_1	CUS_5241	CUS_7794	CUS_5241	Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family.	Trypsin; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595.	0.493