Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CUS_7886Cyclic diguanylate phosphodiesterase (EAL) domain protein; Identified by match to protein family HMM PF00563. (252 aa)    
Predicted Functional Partners:
CUS_5287
Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.
 
 0.923
CUS_5104
Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.
 
 0.922
CUS_7982
Cyclic diguanylate phosphodiesterase (EAL) domain protein; Identified by match to protein family HMM PF00563.
 
 0.916
CUS_6662
Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.
 
 0.865
CUS_8104
Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00990.
 
 0.864
CUS_7336
Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.
 
 0.860
CUS_6841
Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.
 
 0.857
CUS_5427
Cyclic diguanylate phosphodiesterase (EAL) domain protein; Identified by match to protein family HMM PF00563.
 
 
 0.855
CUS_7990
Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.
 
 0.846
CUS_7059
Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM PF08495; match to protein family HMM TIGR00254.
 
 
 0.834
Your Current Organism:
Ruminococcus albus 8
NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8
Server load: low (28%) [HD]