CUS_7952 protein (Ruminococcus albus 8) - STRING interaction network

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Score

CUS_7952

DNA gyrase, B subunit, C-terminal domain protein; Identified by match to protein family HMM PF00204; match to protein family HMM PF00986. (661 aa)

Predicted Functional Partners:

CUS_7953

0.996

gyrA

0.987

CUS_7868

0.762

CUS_7873

0.762

CUS_7951

0.762

recF

0.727

recQ

0.652

dnaN

0.651

CUS_5503

0.547

CUS_7471

0.547

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_5503	CUS_7471	CUS_5503	CUS_7471	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687; match to protein family HMM PF06696.	0.709
CUS_5503	CUS_7952	CUS_5503	CUS_7952	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	DNA gyrase, B subunit, C-terminal domain protein; Identified by match to protein family HMM PF00204; match to protein family HMM PF00986.	0.547
CUS_5503	recQ	CUS_5503	CUS_5293	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM PF09382; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389.	0.693
CUS_7471	CUS_5503	CUS_7471	CUS_5503	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687; match to protein family HMM PF06696.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.709
CUS_7471	CUS_7952	CUS_7471	CUS_7952	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687; match to protein family HMM PF06696.	DNA gyrase, B subunit, C-terminal domain protein; Identified by match to protein family HMM PF00204; match to protein family HMM PF00986.	0.547
CUS_7471	recQ	CUS_7471	CUS_5293	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687; match to protein family HMM PF06696.	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM PF09382; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389.	0.693
CUS_7868	CUS_7952	CUS_7868	CUS_7952	Pentapeptide repeat protein; Identified by match to protein family HMM PF00805.	DNA gyrase, B subunit, C-terminal domain protein; Identified by match to protein family HMM PF00204; match to protein family HMM PF00986.	0.762
CUS_7873	CUS_7952	CUS_7873	CUS_7952	Pentapeptide repeat protein; Identified by match to protein family HMM PF00805.	DNA gyrase, B subunit, C-terminal domain protein; Identified by match to protein family HMM PF00204; match to protein family HMM PF00986.	0.762
CUS_7951	CUS_7952	CUS_7951	CUS_7952	Hypothetical protein; Identified by glimmer; putative.	DNA gyrase, B subunit, C-terminal domain protein; Identified by match to protein family HMM PF00204; match to protein family HMM PF00986.	0.762
CUS_7951	CUS_7953	CUS_7951	CUS_7953	Hypothetical protein; Identified by glimmer; putative.	DNA gyrase/topoisomerase IV, A subunit; Identified by match to protein family HMM PF00521; match to protein family HMM PF03989.	0.622
CUS_7952	CUS_5503	CUS_7952	CUS_5503	DNA gyrase, B subunit, C-terminal domain protein; Identified by match to protein family HMM PF00204; match to protein family HMM PF00986.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.547
CUS_7952	CUS_7471	CUS_7952	CUS_7471	DNA gyrase, B subunit, C-terminal domain protein; Identified by match to protein family HMM PF00204; match to protein family HMM PF00986.	Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687; match to protein family HMM PF06696.	0.547
CUS_7952	CUS_7868	CUS_7952	CUS_7868	DNA gyrase, B subunit, C-terminal domain protein; Identified by match to protein family HMM PF00204; match to protein family HMM PF00986.	Pentapeptide repeat protein; Identified by match to protein family HMM PF00805.	0.762
CUS_7952	CUS_7873	CUS_7952	CUS_7873	DNA gyrase, B subunit, C-terminal domain protein; Identified by match to protein family HMM PF00204; match to protein family HMM PF00986.	Pentapeptide repeat protein; Identified by match to protein family HMM PF00805.	0.762
CUS_7952	CUS_7951	CUS_7952	CUS_7951	DNA gyrase, B subunit, C-terminal domain protein; Identified by match to protein family HMM PF00204; match to protein family HMM PF00986.	Hypothetical protein; Identified by glimmer; putative.	0.762
CUS_7952	CUS_7953	CUS_7952	CUS_7953	DNA gyrase, B subunit, C-terminal domain protein; Identified by match to protein family HMM PF00204; match to protein family HMM PF00986.	DNA gyrase/topoisomerase IV, A subunit; Identified by match to protein family HMM PF00521; match to protein family HMM PF03989.	0.996
CUS_7952	dnaN	CUS_7952	CUS_4974	DNA gyrase, B subunit, C-terminal domain protein; Identified by match to protein family HMM PF00204; match to protein family HMM PF00986.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.651
CUS_7952	gyrA	CUS_7952	CUS_4965	DNA gyrase, B subunit, C-terminal domain protein; Identified by match to protein family HMM PF00204; match to protein family HMM PF00986.	DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	0.987
CUS_7952	recF	CUS_7952	CUS_4972	DNA gyrase, B subunit, C-terminal domain protein; Identified by match to protein family HMM PF00204; match to protein family HMM PF00986.	DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.	0.727
CUS_7952	recQ	CUS_7952	CUS_5293	DNA gyrase, B subunit, C-terminal domain protein; Identified by match to protein family HMM PF00204; match to protein family HMM PF00986.	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM PF09382; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389.	0.652