CUS_7983 protein (Ruminococcus albus 8) - STRING interaction network

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Score

CUS_7983

Sugar-binding domain protein; Identified by match to protein family HMM PF00532. (580 aa)

Predicted Functional Partners:

CUS_5269

0.773

CUS_6688

0.773

CUS_7982

0.773

CUS_6128

0.772

CUS_6739

0.771

CUS_7148

0.767

CUS_6857

0.757

CUS_5212

0.751

CUS_6907

0.721

CUS_5644

0.672

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CUS_5212	CUS_5269	Putative arabinose metabolism transcriptional repressor; Identified by match to protein family HMM PF00392; match to protein family HMM PF00532.	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	0.741
CUS_5212	CUS_5644	Putative arabinose metabolism transcriptional repressor; Identified by match to protein family HMM PF00392; match to protein family HMM PF00532.	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	0.672
CUS_5212	CUS_6688	Putative arabinose metabolism transcriptional repressor; Identified by match to protein family HMM PF00392; match to protein family HMM PF00532.	Putative catabolite control protein A; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	0.737
CUS_5212	CUS_7983	Putative arabinose metabolism transcriptional repressor; Identified by match to protein family HMM PF00392; match to protein family HMM PF00532.	Sugar-binding domain protein; Identified by match to protein family HMM PF00532.	0.751
CUS_5269	CUS_5212	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	Putative arabinose metabolism transcriptional repressor; Identified by match to protein family HMM PF00392; match to protein family HMM PF00532.	0.741
CUS_5269	CUS_5644	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	0.672
CUS_5269	CUS_6857	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF00532.	0.754
CUS_5269	CUS_6907	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.	0.742
CUS_5269	CUS_7983	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	Sugar-binding domain protein; Identified by match to protein family HMM PF00532.	0.773
CUS_5644	CUS_5212	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	Putative arabinose metabolism transcriptional repressor; Identified by match to protein family HMM PF00392; match to protein family HMM PF00532.	0.672
CUS_5644	CUS_5269	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	0.672
CUS_5644	CUS_6128	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	Sugar-binding domain protein; Identified by match to protein family HMM PF00532.	0.672
CUS_5644	CUS_6688	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	Putative catabolite control protein A; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	0.672
CUS_5644	CUS_6739	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	Sugar-binding domain protein; Identified by match to protein family HMM PF00532.	0.672
CUS_5644	CUS_6857	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF00532.	0.672
CUS_5644	CUS_7148	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	0.672
CUS_5644	CUS_7983	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	Sugar-binding domain protein; Identified by match to protein family HMM PF00532.	0.672
CUS_6128	CUS_5644	Sugar-binding domain protein; Identified by match to protein family HMM PF00532.	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	0.672
CUS_6128	CUS_6907	Sugar-binding domain protein; Identified by match to protein family HMM PF00532.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.	0.755
CUS_6128	CUS_7983	Sugar-binding domain protein; Identified by match to protein family HMM PF00532.	Sugar-binding domain protein; Identified by match to protein family HMM PF00532.	0.772