CUS_7993 protein (Ruminococcus albus 8) - STRING interaction network

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second shell of interactors

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

CUS_7993

Hypothetical protein. (436 aa)

Predicted Functional Partners:

CUS_7992

0.932

CUS_7991

0.909

CUS_7989

0.757

CUS_7883

0.703

CUS_7994

0.694

CUS_7882

0.687

CUS_5194

0.597

CUS_5603

0.513

CUS_6046

0.494

CUS_7228

0.494

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CUS_5194	CUS_5603	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	0.759
CUS_5194	CUS_6046	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	Conserved domain protein.	0.697
CUS_5194	CUS_7228	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	0.684
CUS_5194	CUS_7882	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02228.	0.769
CUS_5194	CUS_7883	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	Hypothetical protein.	0.723
CUS_5194	CUS_7989	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	Hypothetical protein; Identified by glimmer; putative.	0.660
CUS_5194	CUS_7991	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	Conserved domain protein.	0.718
CUS_5194	CUS_7992	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.	0.633
CUS_5194	CUS_7993	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	Hypothetical protein.	0.597
CUS_5603	CUS_5194	Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	0.759
CUS_5603	CUS_6046	Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	Conserved domain protein.	0.724
CUS_5603	CUS_7228	Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	0.727
CUS_5603	CUS_7882	Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02228.	0.769
CUS_5603	CUS_7883	Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	Hypothetical protein.	0.726
CUS_5603	CUS_7989	Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	Hypothetical protein; Identified by glimmer; putative.	0.703
CUS_5603	CUS_7991	Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	Conserved domain protein.	0.709
CUS_5603	CUS_7992	Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.	0.568
CUS_5603	CUS_7993	Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	Hypothetical protein.	0.513
CUS_6046	CUS_5194	Conserved domain protein.	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	0.697
CUS_6046	CUS_5603	Conserved domain protein.	Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	0.724