CUS_8034 protein (Ruminococcus albus 8) - STRING interaction network

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CUS_8034

Putative RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. (217 aa)

Predicted Functional Partners:

rpoB

0.786

rpoC

0.786

CUS_5811

0.785

rpoA

0.785

CUS_5966

0.726

CUS_6238

0.644

spoIVA

0.644

spoVAC

0.631

spoVAE

0.628

spoVAD

0.610

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_5811	CUS_8034	CUS_5811	CUS_8034	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Putative RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family.	0.785
CUS_5811	rpoA	CUS_5811	CUS_6485	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	RNA polymerase, alpha subunit C-terminal domain protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.995
CUS_5811	rpoB	CUS_5811	CUS_7658	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.993
CUS_5811	rpoC	CUS_5811	CUS_7659	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.986
CUS_5966	CUS_8034	CUS_5966	CUS_8034	Putative stage II sporulation protein E; Identified by match to protein family HMM PF07228.	Putative RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family.	0.726
CUS_5966	spoIVA	CUS_5966	CUS_7585	Putative stage II sporulation protein E; Identified by match to protein family HMM PF07228.	Stage IV sporulation protein A; Identified by match to protein family HMM PF09547; match to protein family HMM TIGR02836.	0.826
CUS_5966	spoVAC	CUS_5966	CUS_5741	Putative stage II sporulation protein E; Identified by match to protein family HMM PF07228.	Stage V sporulation protein AC; Identified by match to protein family HMM PF03862; match to protein family HMM TIGR02838.	0.774
CUS_5966	spoVAD	CUS_5966	CUS_4575	Putative stage II sporulation protein E; Identified by match to protein family HMM PF07228.	Stage V sporulation protein AD; Identified by match to protein family HMM PF07451.	0.774
CUS_5966	spoVAE	CUS_5966	CUS_4576	Putative stage II sporulation protein E; Identified by match to protein family HMM PF07228.	Stage V sporulation protein AE; Identified by match to protein family HMM PF03862; match to protein family HMM TIGR02839.	0.774
CUS_6238	CUS_8034	CUS_6238	CUS_8034	Methyltransferase CheR, SAM binding domain protein; Identified by match to protein family HMM PF01739; match to protein family HMM PF03705.	Putative RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family.	0.644
CUS_8034	CUS_5811	CUS_8034	CUS_5811	Putative RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.785
CUS_8034	CUS_5966	CUS_8034	CUS_5966	Putative RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family.	Putative stage II sporulation protein E; Identified by match to protein family HMM PF07228.	0.726
CUS_8034	CUS_6238	CUS_8034	CUS_6238	Putative RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family.	Methyltransferase CheR, SAM binding domain protein; Identified by match to protein family HMM PF01739; match to protein family HMM PF03705.	0.644
CUS_8034	rpoA	CUS_8034	CUS_6485	Putative RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family.	RNA polymerase, alpha subunit C-terminal domain protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.785
CUS_8034	rpoB	CUS_8034	CUS_7658	Putative RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.786
CUS_8034	rpoC	CUS_8034	CUS_7659	Putative RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.786
CUS_8034	spoIVA	CUS_8034	CUS_7585	Putative RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family.	Stage IV sporulation protein A; Identified by match to protein family HMM PF09547; match to protein family HMM TIGR02836.	0.644
CUS_8034	spoVAC	CUS_8034	CUS_5741	Putative RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family.	Stage V sporulation protein AC; Identified by match to protein family HMM PF03862; match to protein family HMM TIGR02838.	0.631
CUS_8034	spoVAD	CUS_8034	CUS_4575	Putative RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family.	Stage V sporulation protein AD; Identified by match to protein family HMM PF07451.	0.610
CUS_8034	spoVAE	CUS_8034	CUS_4576	Putative RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family.	Stage V sporulation protein AE; Identified by match to protein family HMM PF03862; match to protein family HMM TIGR02839.	0.628

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