STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUS_8074Putative membrane protein. (243 aa)    
Predicted Functional Partners:
CUS_8075
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
  0.965
CUS_8073
Conserved domain protein; Overlaps another CDS with the same product name.
 
  
 0.946
CUS_8072
Conserved domain protein; Overlaps another CDS with the same product name.
 
     0.911
CUS_7294
Putative bacitracin ABC transporter, ATP-binding protein BcrA; Identified by match to protein family HMM PF00005.
 
  0.865
CUS_7292
Conserved domain protein; Overlaps another CDS with the same product name.
 
  
 0.790
CUS_5423
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
  0.609
CUS_7291
Conserved domain protein; Overlaps another CDS with the same product name.
 
     0.487
CUS_6962
Putative bacitracin ABC transporter, ATP-binding protein BcrA.
  
  0.481
CUS_6317
Putative bacitracin ABC transporter, ATP-binding protein BcrA; Identified by match to protein family HMM PF00005.
  
  0.476
CUS_7246
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
  0.474
Your Current Organism:
Ruminococcus albus 8
NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.