Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| CUS_8110 | CUS_8111 | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Identified by match to protein family HMM PF07009. | 0.857 |
| CUS_8110 | CUS_8112 | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | 0.943 |
| CUS_8110 | CUS_8113 | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| CUS_8110 | CUS_8114 | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Putative HTH-type transcriptional regulator IscR; Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738. | 0.580 |
| CUS_8111 | CUS_8110 | Identified by match to protein family HMM PF07009. | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.857 |
| CUS_8111 | CUS_8112 | Identified by match to protein family HMM PF07009. | Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | 0.977 |
| CUS_8111 | CUS_8113 | Identified by match to protein family HMM PF07009. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| CUS_8111 | CUS_8114 | Identified by match to protein family HMM PF07009. | Putative HTH-type transcriptional regulator IscR; Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738. | 0.580 |
| CUS_8112 | CUS_8110 | Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.943 |
| CUS_8112 | CUS_8111 | Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | Identified by match to protein family HMM PF07009. | 0.977 |
| CUS_8112 | CUS_8113 | Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| CUS_8112 | CUS_8114 | Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | Putative HTH-type transcriptional regulator IscR; Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738. | 0.580 |
| CUS_8113 | CUS_8110 | Hypothetical protein; Identified by glimmer; putative. | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.773 |
| CUS_8113 | CUS_8111 | Hypothetical protein; Identified by glimmer; putative. | Identified by match to protein family HMM PF07009. | 0.773 |
| CUS_8113 | CUS_8112 | Hypothetical protein; Identified by glimmer; putative. | Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | 0.773 |
| CUS_8113 | CUS_8114 | Hypothetical protein; Identified by glimmer; putative. | Putative HTH-type transcriptional regulator IscR; Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738. | 0.580 |
| CUS_8114 | CUS_8110 | Putative HTH-type transcriptional regulator IscR; Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738. | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.580 |
| CUS_8114 | CUS_8111 | Putative HTH-type transcriptional regulator IscR; Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738. | Identified by match to protein family HMM PF07009. | 0.580 |
| CUS_8114 | CUS_8112 | Putative HTH-type transcriptional regulator IscR; Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738. | Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | 0.580 |
| CUS_8114 | CUS_8113 | Putative HTH-type transcriptional regulator IscR; Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738. | Hypothetical protein; Identified by glimmer; putative. | 0.580 |