CUS_8151 protein (Ruminococcus albus 8) - STRING interaction network

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CUS_8151

Sigma-70 region 2; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily. (191 aa)

Predicted Functional Partners:

CUS_8152

0.741

rplA

0.424

rplK

0.410

CUS_6238

0.406

CUS_5017

0.403

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_5017	CUS_8151	CUS_5017	CUS_8151	Sigma-70, region 4; Identified by match to protein family HMM PF04545; match to protein family HMM PF08281.	Sigma-70 region 2; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.403
CUS_6238	CUS_8151	CUS_6238	CUS_8151	Methyltransferase CheR, SAM binding domain protein; Identified by match to protein family HMM PF01739; match to protein family HMM PF03705.	Sigma-70 region 2; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.406
CUS_8151	CUS_5017	CUS_8151	CUS_5017	Sigma-70 region 2; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Sigma-70, region 4; Identified by match to protein family HMM PF04545; match to protein family HMM PF08281.	0.403
CUS_8151	CUS_6238	CUS_8151	CUS_6238	Sigma-70 region 2; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Methyltransferase CheR, SAM binding domain protein; Identified by match to protein family HMM PF01739; match to protein family HMM PF03705.	0.406
CUS_8151	CUS_8152	CUS_8151	CUS_8152	Sigma-70 region 2; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Hypothetical protein; Identified by glimmer; putative.	0.741
CUS_8151	rplA	CUS_8151	CUS_8153	Sigma-70 region 2; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.424
CUS_8151	rplK	CUS_8151	CUS_8154	Sigma-70 region 2; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.410
CUS_8152	CUS_8151	CUS_8152	CUS_8151	Hypothetical protein; Identified by glimmer; putative.	Sigma-70 region 2; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.741
CUS_8152	rplA	CUS_8152	CUS_8153	Hypothetical protein; Identified by glimmer; putative.	Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.439
CUS_8152	rplK	CUS_8152	CUS_8154	Hypothetical protein; Identified by glimmer; putative.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.424
rplA	CUS_8151	CUS_8153	CUS_8151	Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	Sigma-70 region 2; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.424
rplA	CUS_8152	CUS_8153	CUS_8152	Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	Hypothetical protein; Identified by glimmer; putative.	0.439
rplA	rplK	CUS_8153	CUS_8154	Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.999
rplK	CUS_8151	CUS_8154	CUS_8151	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Sigma-70 region 2; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.410
rplK	CUS_8152	CUS_8154	CUS_8152	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Hypothetical protein; Identified by glimmer; putative.	0.424
rplK	rplA	CUS_8154	CUS_8153	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.999

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