Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SPO0643Oxidoreductase, aldo/keto reductase family. (312 aa)    
Predicted Functional Partners:
SPO0642
Oxidoreductase, FAD-binding protein.
 
     0.807
SPO0641
Hypothetical protein; Identified by similarity to GB:AAP57703.1.
     
 0.778
SPO1298
Oxidoreductase, aldo/keto reductase family protein; Identified by match to protein family HMM PF00248.
 
   
 0.743
SPO0640
4-carboxymuconolactone decarboxylase domain/ alkylhydroperoxidase AhpD family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.590
SPO0645
Multidrug resistance efflux pump, putative; Identified by similarity to GB:BAC48748.1.
  
    0.537
SPO0644
Hypothetical protein; Identified by similarity to GB:BAC48747.1.
       0.534
Your Current Organism:
Ruegeria pomeroyi
NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3
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