STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
naaSN-acetyltaurine amidohydrolase; PMID: 21757489. (547 aa)    
Predicted Functional Partners:
naaT
Metallochaperone, putative; PMID: 21757489.
   
 0.895
naaA
N-acetyltaurine ABC transporter, periplasmic binding protein; PMID: 21757489.
 
     0.801
naaR
Transcriptional regulator, LysR family; PMID: 21757489; Belongs to the LysR transcriptional regulatory family.
 
     0.628
naaB-2
N-acetyltaurine ABC transporter, permease protein; Identified by similarity to SP:P42063; PMID: 21757489.
 
     0.531
naaB
N-acetyltaurine ABC transporter, permease protein; Identified by similarity to SP:P42062; PMID: 21757489.
 
     0.487
fxsA
FxsA; Identified by similarity to SP:P37147; match to protein family HMM PF04186.
  
  
 0.422
naaC
N-acetyltaurine ABC transporter, ATP-binding protein; Identified by similarity to SP:P26905; PMID: 21757489; Belongs to the ABC transporter superfamily.
 
     0.406
Your Current Organism:
Ruegeria pomeroyi
NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3
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