Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
tauATaurine ABC transporter, periplasmic taurine-binding protein; Assignment partly based on membership in taurine ABC transporter gene cluster; identified by similarity to SP:Q47537; PMID: 16541231. (336 aa)    
Predicted Functional Partners:
tauC
Taurine ABC transporter, permease protein; Identified by similarity to SP:Q47539; PMID: 16541231.
 
 0.998
tauB
Taurine ABC transporter, ATP-binding protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
 
 0.991
SPO1786
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
  
 0.867
SPO3618
Sulfonate ABC transporter, permease protein, putative; Identified by similarity to SP:P75851; similarity to SP:Q47539; match to protein family HMM PF00528.
  
 0.804
SPO0053
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.543
xsc
Sulfoacetaldehyde acetyltransferase; Identified by similarity to SP:Q84H44; match to protein family HMM PF00205; match to protein family HMM PF02776; PMID: 16541231; Belongs to the TPP enzyme family.
  
     0.528
tauR
Taurine transcriptional regulator; Identified by match to protein family HMM PF00392; PMID: 17153584.
 
   
 0.512
tpa
Taurine--pyruvate aminotransferase; Identified by similarity to SP:Q9APM5; PMID: 16541231; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.451
SPO3380
Gamma-butyrobetaine hydroxylase, putative; Identified by similarity to SP:P80193; match to protein family HMM PF03322.
  
  
 0.443
SPO1787
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
  
 0.433
Your Current Organism:
Ruegeria pomeroyi
NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3
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